Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.56□□□□□ -0.24
Clcf1Q9QZM3 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clcf1Q9QZM3 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.56□□□□□ -0.24
Clcf1Q9QZM3 Gm14822-201ENSMUST00000122247 291 ntBASIC13.56□□□□□ -0.24
Clcf1Q9QZM3 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clcf1Q9QZM3 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Clcf1Q9QZM3 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clcf1Q9QZM3 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clcf1Q9QZM3 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Clcf1Q9QZM3 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Clcf1Q9QZM3 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clcf1Q9QZM3 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC13.56□□□□□ -0.24
Clcf1Q9QZM3 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clcf1Q9QZM3 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clcf1Q9QZM3 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clcf1Q9QZM3 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clcf1Q9QZM3 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clcf1Q9QZM3 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.56□□□□□ -0.24
Clcf1Q9QZM3 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC13.56□□□□□ -0.24
Clcf1Q9QZM3 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clcf1Q9QZM3 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clcf1Q9QZM3 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clcf1Q9QZM3 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clcf1Q9QZM3 Gm5184-201ENSMUST00000220417 1702 ntBASIC13.56□□□□□ -0.24
Clcf1Q9QZM3 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clcf1Q9QZM3 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clcf1Q9QZM3 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clcf1Q9QZM3 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clcf1Q9QZM3 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Clcf1Q9QZM3 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clcf1Q9QZM3 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Clcf1Q9QZM3 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clcf1Q9QZM3 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Clcf1Q9QZM3 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clcf1Q9QZM3 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Clcf1Q9QZM3 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Clcf1Q9QZM3 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clcf1Q9QZM3 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clcf1Q9QZM3 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clcf1Q9QZM3 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Clcf1Q9QZM3 Gm4913-201ENSMUST00000117075 1290 ntBASIC13.55□□□□□ -0.24
Clcf1Q9QZM3 H2af-ps-201ENSMUST00000119066 295 ntBASIC13.55□□□□□ -0.24
Clcf1Q9QZM3 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13.55□□□□□ -0.24
Clcf1Q9QZM3 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clcf1Q9QZM3 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Clcf1Q9QZM3 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.55□□□□□ -0.24
Clcf1Q9QZM3 Gm43575-201ENSMUST00000196420 516 ntBASIC13.55□□□□□ -0.24
Clcf1Q9QZM3 Gm18246-201ENSMUST00000221023 728 ntBASIC13.55□□□□□ -0.24
Clcf1Q9QZM3 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clcf1Q9QZM3 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Clcf1Q9QZM3 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clcf1Q9QZM3 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.55□□□□□ -0.24
Clcf1Q9QZM3 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clcf1Q9QZM3 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clcf1Q9QZM3 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC13.55□□□□□ -0.24
Clcf1Q9QZM3 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clcf1Q9QZM3 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clcf1Q9QZM3 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clcf1Q9QZM3 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Clcf1Q9QZM3 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC13.55□□□□□ -0.24
Clcf1Q9QZM3 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC13.55□□□□□ -0.24
Clcf1Q9QZM3 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Clcf1Q9QZM3 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.55□□□□□ -0.24
Clcf1Q9QZM3 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
Clcf1Q9QZM3 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcf1Q9QZM3 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.54□□□□□ -0.24
Clcf1Q9QZM3 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Clcf1Q9QZM3 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Clcf1Q9QZM3 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcf1Q9QZM3 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcf1Q9QZM3 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Clcf1Q9QZM3 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Clcf1Q9QZM3 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcf1Q9QZM3 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Clcf1Q9QZM3 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Clcf1Q9QZM3 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcf1Q9QZM3 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.54□□□□□ -0.24
Clcf1Q9QZM3 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Clcf1Q9QZM3 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Clcf1Q9QZM3 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.54□□□□□ -0.24
Clcf1Q9QZM3 Gm17968-201ENSMUST00000194902 784 ntBASIC13.54□□□□□ -0.24
Clcf1Q9QZM3 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcf1Q9QZM3 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Clcf1Q9QZM3 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Clcf1Q9QZM3 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcf1Q9QZM3 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcf1Q9QZM3 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcf1Q9QZM3 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcf1Q9QZM3 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcf1Q9QZM3 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Clcf1Q9QZM3 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcf1Q9QZM3 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.54□□□□□ -0.24
Clcf1Q9QZM3 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
Clcf1Q9QZM3 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clcf1Q9QZM3 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC13.53□□□□□ -0.24
Clcf1Q9QZM3 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clcf1Q9QZM3 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Clcf1Q9QZM3 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clcf1Q9QZM3 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.53□□□□□ -0.24
Clcf1Q9QZM3 Gm23935-201ENSMUST00000102303 57 ntBASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms