Protein–RNA interactions for Protein: Q9EQG9

Col4a3bp, Collagen type IV alpha-3-binding protein, mousemouse

Predictions only

Length 624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bpQ9EQG9 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col4a3bpQ9EQG9 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col4a3bpQ9EQG9 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col4a3bpQ9EQG9 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Col4a3bpQ9EQG9 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col4a3bpQ9EQG9 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col4a3bpQ9EQG9 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Col4a3bpQ9EQG9 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Col4a3bpQ9EQG9 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col4a3bpQ9EQG9 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Col4a3bpQ9EQG9 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col4a3bpQ9EQG9 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col4a3bpQ9EQG9 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col4a3bpQ9EQG9 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Col4a3bpQ9EQG9 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col4a3bpQ9EQG9 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col4a3bpQ9EQG9 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Col4a3bpQ9EQG9 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col4a3bpQ9EQG9 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Col4a3bpQ9EQG9 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col4a3bpQ9EQG9 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Col4a3bpQ9EQG9 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Col4a3bpQ9EQG9 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Col4a3bpQ9EQG9 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Col4a3bpQ9EQG9 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC17.09■□□□□ 0.33
Col4a3bpQ9EQG9 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC17.09■□□□□ 0.33
Col4a3bpQ9EQG9 AC084391.1-201ENSMUST00000200651 141 ntBASIC17.09■□□□□ 0.33
Col4a3bpQ9EQG9 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col4a3bpQ9EQG9 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col4a3bpQ9EQG9 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col4a3bpQ9EQG9 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Col4a3bpQ9EQG9 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC17.09■□□□□ 0.33
Col4a3bpQ9EQG9 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col4a3bpQ9EQG9 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Col4a3bpQ9EQG9 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col4a3bpQ9EQG9 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col4a3bpQ9EQG9 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Col4a3bpQ9EQG9 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC17.09■□□□□ 0.33
Col4a3bpQ9EQG9 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Col4a3bpQ9EQG9 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Col4a3bpQ9EQG9 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Col4a3bpQ9EQG9 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Col4a3bpQ9EQG9 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Col4a3bpQ9EQG9 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Col4a3bpQ9EQG9 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Col4a3bpQ9EQG9 Gm14140-201ENSMUST00000119999 995 ntBASIC17.08■□□□□ 0.32
Col4a3bpQ9EQG9 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC17.08■□□□□ 0.32
Col4a3bpQ9EQG9 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col4a3bpQ9EQG9 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col4a3bpQ9EQG9 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col4a3bpQ9EQG9 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col4a3bpQ9EQG9 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col4a3bpQ9EQG9 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC17.08■□□□□ 0.32
Col4a3bpQ9EQG9 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col4a3bpQ9EQG9 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col4a3bpQ9EQG9 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Col4a3bpQ9EQG9 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col4a3bpQ9EQG9 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Col4a3bpQ9EQG9 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col4a3bpQ9EQG9 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col4a3bpQ9EQG9 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col4a3bpQ9EQG9 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col4a3bpQ9EQG9 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Col4a3bpQ9EQG9 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Col4a3bpQ9EQG9 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col4a3bpQ9EQG9 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Col4a3bpQ9EQG9 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Col4a3bpQ9EQG9 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col4a3bpQ9EQG9 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC17.07■□□□□ 0.32
Col4a3bpQ9EQG9 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col4a3bpQ9EQG9 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC17.07■□□□□ 0.32
Col4a3bpQ9EQG9 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC17.07■□□□□ 0.32
Col4a3bpQ9EQG9 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC17.07■□□□□ 0.32
Col4a3bpQ9EQG9 AC164567.1-201ENSMUST00000219185 960 ntBASIC17.07■□□□□ 0.32
Col4a3bpQ9EQG9 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC17.07■□□□□ 0.32
Col4a3bpQ9EQG9 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col4a3bpQ9EQG9 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Col4a3bpQ9EQG9 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col4a3bpQ9EQG9 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col4a3bpQ9EQG9 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col4a3bpQ9EQG9 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
Col4a3bpQ9EQG9 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col4a3bpQ9EQG9 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col4a3bpQ9EQG9 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col4a3bpQ9EQG9 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Col4a3bpQ9EQG9 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col4a3bpQ9EQG9 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col4a3bpQ9EQG9 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col4a3bpQ9EQG9 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Col4a3bpQ9EQG9 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a3bpQ9EQG9 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Col4a3bpQ9EQG9 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a3bpQ9EQG9 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a3bpQ9EQG9 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a3bpQ9EQG9 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a3bpQ9EQG9 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a3bpQ9EQG9 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a3bpQ9EQG9 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a3bpQ9EQG9 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a3bpQ9EQG9 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms