Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Upf1Q9EPU0 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Upf1Q9EPU0 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Upf1Q9EPU0 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Upf1Q9EPU0 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Upf1Q9EPU0 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Upf1Q9EPU0 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Upf1Q9EPU0 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Upf1Q9EPU0 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Upf1Q9EPU0 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Upf1Q9EPU0 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Upf1Q9EPU0 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Upf1Q9EPU0 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Upf1Q9EPU0 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC16.72■□□□□ 0.27
Upf1Q9EPU0 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.72■□□□□ 0.27
Upf1Q9EPU0 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Upf1Q9EPU0 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Upf1Q9EPU0 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Upf1Q9EPU0 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Upf1Q9EPU0 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Upf1Q9EPU0 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Upf1Q9EPU0 Ighv1-62-201ENSMUST00000193406 350 ntBASIC16.72■□□□□ 0.27
Upf1Q9EPU0 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Upf1Q9EPU0 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Upf1Q9EPU0 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC16.72■□□□□ 0.27
Upf1Q9EPU0 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Upf1Q9EPU0 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Upf1Q9EPU0 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Upf1Q9EPU0 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Upf1Q9EPU0 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Upf1Q9EPU0 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.72■□□□□ 0.27
Upf1Q9EPU0 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Upf1Q9EPU0 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Upf1Q9EPU0 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Upf1Q9EPU0 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Upf1Q9EPU0 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Upf1Q9EPU0 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Upf1Q9EPU0 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.71■□□□□ 0.27
Upf1Q9EPU0 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Upf1Q9EPU0 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Upf1Q9EPU0 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC16.71■□□□□ 0.27
Upf1Q9EPU0 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Upf1Q9EPU0 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Upf1Q9EPU0 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Upf1Q9EPU0 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC16.71■□□□□ 0.27
Upf1Q9EPU0 Gm6334-201ENSMUST00000207083 228 ntBASIC16.71■□□□□ 0.27
Upf1Q9EPU0 AC154806.6-201ENSMUST00000228192 202 ntBASIC16.71■□□□□ 0.27
Upf1Q9EPU0 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Upf1Q9EPU0 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC16.71■□□□□ 0.27
Upf1Q9EPU0 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Upf1Q9EPU0 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Upf1Q9EPU0 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Upf1Q9EPU0 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Upf1Q9EPU0 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Upf1Q9EPU0 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Upf1Q9EPU0 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Upf1Q9EPU0 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC16.71■□□□□ 0.27
Upf1Q9EPU0 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Upf1Q9EPU0 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Upf1Q9EPU0 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Upf1Q9EPU0 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Upf1Q9EPU0 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Upf1Q9EPU0 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Upf1Q9EPU0 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Upf1Q9EPU0 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Upf1Q9EPU0 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Upf1Q9EPU0 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Upf1Q9EPU0 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Upf1Q9EPU0 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Upf1Q9EPU0 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Upf1Q9EPU0 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC16.7■□□□□ 0.26
Upf1Q9EPU0 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Upf1Q9EPU0 Gm12241-201ENSMUST00000118330 726 ntBASIC16.7■□□□□ 0.26
Upf1Q9EPU0 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Upf1Q9EPU0 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Upf1Q9EPU0 Gm7895-201ENSMUST00000187459 1173 ntBASIC16.7■□□□□ 0.26
Upf1Q9EPU0 Gm42997-202ENSMUST00000200321 985 ntBASIC16.7■□□□□ 0.26
Upf1Q9EPU0 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Upf1Q9EPU0 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Upf1Q9EPU0 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Upf1Q9EPU0 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Upf1Q9EPU0 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
Upf1Q9EPU0 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Upf1Q9EPU0 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Upf1Q9EPU0 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Upf1Q9EPU0 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Upf1Q9EPU0 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Upf1Q9EPU0 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC16.69■□□□□ 0.26
Upf1Q9EPU0 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Upf1Q9EPU0 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Upf1Q9EPU0 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Upf1Q9EPU0 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
Upf1Q9EPU0 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Upf1Q9EPU0 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Upf1Q9EPU0 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Upf1Q9EPU0 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC16.69■□□□□ 0.26
Upf1Q9EPU0 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Upf1Q9EPU0 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Upf1Q9EPU0 Gm4993-201ENSMUST00000118719 1174 ntBASIC16.69■□□□□ 0.26
Upf1Q9EPU0 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms