Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Chmp2aQ9DB34 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Chmp2aQ9DB34 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Chmp2aQ9DB34 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp2aQ9DB34 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp2aQ9DB34 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC15.57■□□□□ 0.08
Chmp2aQ9DB34 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp2aQ9DB34 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp2aQ9DB34 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp2aQ9DB34 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
Chmp2aQ9DB34 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
Chmp2aQ9DB34 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp2aQ9DB34 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp2aQ9DB34 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp2aQ9DB34 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Chmp2aQ9DB34 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp2aQ9DB34 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC15.57■□□□□ 0.08
Chmp2aQ9DB34 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp2aQ9DB34 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp2aQ9DB34 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Chmp2aQ9DB34 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp2aQ9DB34 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Chmp2aQ9DB34 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp2aQ9DB34 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Chmp2aQ9DB34 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.57■□□□□ 0.08
Chmp2aQ9DB34 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Chmp2aQ9DB34 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp2aQ9DB34 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp2aQ9DB34 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp2aQ9DB34 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp2aQ9DB34 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.56■□□□□ 0.08
Chmp2aQ9DB34 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Chmp2aQ9DB34 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp2aQ9DB34 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp2aQ9DB34 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Chmp2aQ9DB34 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp2aQ9DB34 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp2aQ9DB34 Mir3113-201ENSMUST00000175478 76 ntBASIC15.56■□□□□ 0.08
Chmp2aQ9DB34 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp2aQ9DB34 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Chmp2aQ9DB34 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.56■□□□□ 0.08
Chmp2aQ9DB34 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Chmp2aQ9DB34 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp2aQ9DB34 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp2aQ9DB34 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp2aQ9DB34 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp2aQ9DB34 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp2aQ9DB34 Celf4-206ENSMUST00000224553 1729 ntBASIC15.56■□□□□ 0.08
Chmp2aQ9DB34 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp2aQ9DB34 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp2aQ9DB34 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp2aQ9DB34 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC15.56■□□□□ 0.08
Chmp2aQ9DB34 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp2aQ9DB34 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Chmp2aQ9DB34 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp2aQ9DB34 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Chmp2aQ9DB34 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp2aQ9DB34 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp2aQ9DB34 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Chmp2aQ9DB34 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp2aQ9DB34 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp2aQ9DB34 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp2aQ9DB34 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp2aQ9DB34 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp2aQ9DB34 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp2aQ9DB34 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp2aQ9DB34 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp2aQ9DB34 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC15.55■□□□□ 0.08
Chmp2aQ9DB34 Gm12008-201ENSMUST00000117791 755 ntBASIC15.55■□□□□ 0.08
Chmp2aQ9DB34 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC15.55■□□□□ 0.08
Chmp2aQ9DB34 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC15.55■□□□□ 0.08
Chmp2aQ9DB34 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
Chmp2aQ9DB34 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Chmp2aQ9DB34 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC15.55■□□□□ 0.08
Chmp2aQ9DB34 Gm17968-201ENSMUST00000194902 784 ntBASIC15.55■□□□□ 0.08
Chmp2aQ9DB34 Gm44945-201ENSMUST00000206764 1187 ntBASIC15.55■□□□□ 0.08
Chmp2aQ9DB34 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC15.55■□□□□ 0.08
Chmp2aQ9DB34 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp2aQ9DB34 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp2aQ9DB34 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp2aQ9DB34 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Chmp2aQ9DB34 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.55■□□□□ 0.08
Chmp2aQ9DB34 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp2aQ9DB34 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Chmp2aQ9DB34 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.55■□□□□ 0.08
Chmp2aQ9DB34 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp2aQ9DB34 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp2aQ9DB34 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Chmp2aQ9DB34 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chmp2aQ9DB34 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chmp2aQ9DB34 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Chmp2aQ9DB34 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chmp2aQ9DB34 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chmp2aQ9DB34 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chmp2aQ9DB34 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chmp2aQ9DB34 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.54■□□□□ 0.08
Chmp2aQ9DB34 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chmp2aQ9DB34 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC15.54■□□□□ 0.08
Chmp2aQ9DB34 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC15.54■□□□□ 0.08
Chmp2aQ9DB34 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms