Protein–RNA interactions for Protein: Q9DA21

Smco2, Single-pass membrane and coiled-coil domain-containing protein 2, mousemouse

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco2Q9DA21 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Smco2Q9DA21 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Smco2Q9DA21 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Smco2Q9DA21 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Smco2Q9DA21 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smco2Q9DA21 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smco2Q9DA21 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smco2Q9DA21 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smco2Q9DA21 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Smco2Q9DA21 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smco2Q9DA21 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smco2Q9DA21 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smco2Q9DA21 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
Smco2Q9DA21 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Smco2Q9DA21 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smco2Q9DA21 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smco2Q9DA21 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smco2Q9DA21 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Smco2Q9DA21 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Smco2Q9DA21 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smco2Q9DA21 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smco2Q9DA21 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC16.8■□□□□ 0.28
Smco2Q9DA21 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smco2Q9DA21 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC16.8■□□□□ 0.28
Smco2Q9DA21 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC16.8■□□□□ 0.28
Smco2Q9DA21 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smco2Q9DA21 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Smco2Q9DA21 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smco2Q9DA21 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Smco2Q9DA21 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smco2Q9DA21 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Smco2Q9DA21 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Smco2Q9DA21 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smco2Q9DA21 Gm45293-201ENSMUST00000209754 1812 ntBASIC16.8■□□□□ 0.28
Smco2Q9DA21 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smco2Q9DA21 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smco2Q9DA21 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smco2Q9DA21 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC16.79■□□□□ 0.28
Smco2Q9DA21 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Smco2Q9DA21 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smco2Q9DA21 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC16.79■□□□□ 0.28
Smco2Q9DA21 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smco2Q9DA21 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smco2Q9DA21 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
Smco2Q9DA21 Gm15920-201ENSMUST00000118998 402 ntBASIC16.79■□□□□ 0.28
Smco2Q9DA21 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC16.79■□□□□ 0.28
Smco2Q9DA21 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC16.79■□□□□ 0.28
Smco2Q9DA21 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC16.79■□□□□ 0.28
Smco2Q9DA21 Gm5628-201ENSMUST00000222318 1049 ntBASIC16.79■□□□□ 0.28
Smco2Q9DA21 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC16.79■□□□□ 0.28
Smco2Q9DA21 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Smco2Q9DA21 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Smco2Q9DA21 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smco2Q9DA21 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smco2Q9DA21 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smco2Q9DA21 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smco2Q9DA21 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Smco2Q9DA21 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smco2Q9DA21 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smco2Q9DA21 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Smco2Q9DA21 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smco2Q9DA21 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Smco2Q9DA21 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smco2Q9DA21 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC16.78■□□□□ 0.28
Smco2Q9DA21 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smco2Q9DA21 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smco2Q9DA21 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smco2Q9DA21 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Smco2Q9DA21 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Smco2Q9DA21 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smco2Q9DA21 Gm11745-201ENSMUST00000121669 448 ntBASIC16.78■□□□□ 0.28
Smco2Q9DA21 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC16.78■□□□□ 0.28
Smco2Q9DA21 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC16.78■□□□□ 0.28
Smco2Q9DA21 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC16.78■□□□□ 0.28
Smco2Q9DA21 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC16.78■□□□□ 0.28
Smco2Q9DA21 Gm44335-201ENSMUST00000196879 141 ntBASIC16.78■□□□□ 0.28
Smco2Q9DA21 Gm44297-201ENSMUST00000198304 141 ntBASIC16.78■□□□□ 0.28
Smco2Q9DA21 Gm44346-201ENSMUST00000198851 141 ntBASIC16.78■□□□□ 0.28
Smco2Q9DA21 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC16.78■□□□□ 0.28
Smco2Q9DA21 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC16.78■□□□□ 0.28
Smco2Q9DA21 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC16.78■□□□□ 0.28
Smco2Q9DA21 Gm10154-201ENSMUST00000084445 354 ntBASIC16.78■□□□□ 0.28
Smco2Q9DA21 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC16.78■□□□□ 0.28
Smco2Q9DA21 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smco2Q9DA21 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smco2Q9DA21 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smco2Q9DA21 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smco2Q9DA21 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smco2Q9DA21 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Smco2Q9DA21 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Smco2Q9DA21 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smco2Q9DA21 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smco2Q9DA21 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16.78■□□□□ 0.28
Smco2Q9DA21 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smco2Q9DA21 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smco2Q9DA21 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.77■□□□□ 0.28
Smco2Q9DA21 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Smco2Q9DA21 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Smco2Q9DA21 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smco2Q9DA21 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms