Protein–RNA interactions for Protein: Q9D968

Hcfc2, Host cell factor 2, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc2Q9D968 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hcfc2Q9D968 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Hcfc2Q9D968 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hcfc2Q9D968 Gm19863-201ENSMUST00000192480 2218 ntBASIC11.35□□□□□ -0.59
Hcfc2Q9D968 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hcfc2Q9D968 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hcfc2Q9D968 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hcfc2Q9D968 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hcfc2Q9D968 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC11.35□□□□□ -0.59
Hcfc2Q9D968 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Hcfc2Q9D968 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Hcfc2Q9D968 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC11.35□□□□□ -0.59
Hcfc2Q9D968 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC11.35□□□□□ -0.59
Hcfc2Q9D968 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC11.35□□□□□ -0.59
Hcfc2Q9D968 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hcfc2Q9D968 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hcfc2Q9D968 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Hcfc2Q9D968 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hcfc2Q9D968 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hcfc2Q9D968 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hcfc2Q9D968 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hcfc2Q9D968 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Hcfc2Q9D968 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Hcfc2Q9D968 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Hcfc2Q9D968 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hcfc2Q9D968 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hcfc2Q9D968 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hcfc2Q9D968 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC11.35□□□□□ -0.59
Hcfc2Q9D968 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Hcfc2Q9D968 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hcfc2Q9D968 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC11.35□□□□□ -0.59
Hcfc2Q9D968 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hcfc2Q9D968 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hcfc2Q9D968 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hcfc2Q9D968 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hcfc2Q9D968 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hcfc2Q9D968 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC11.35□□□□□ -0.59
Hcfc2Q9D968 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hcfc2Q9D968 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hcfc2Q9D968 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hcfc2Q9D968 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hcfc2Q9D968 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hcfc2Q9D968 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Hcfc2Q9D968 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hcfc2Q9D968 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hcfc2Q9D968 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hcfc2Q9D968 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hcfc2Q9D968 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hcfc2Q9D968 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
Hcfc2Q9D968 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hcfc2Q9D968 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hcfc2Q9D968 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC11.34□□□□□ -0.59
Hcfc2Q9D968 Gm10013-201ENSMUST00000106074 672 ntBASIC11.34□□□□□ -0.59
Hcfc2Q9D968 Gm4609-201ENSMUST00000106443 1002 ntBASIC11.34□□□□□ -0.59
Hcfc2Q9D968 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC11.34□□□□□ -0.59
Hcfc2Q9D968 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Hcfc2Q9D968 Gm5138-201ENSMUST00000113842 1002 ntBASIC11.34□□□□□ -0.59
Hcfc2Q9D968 Gm15191-201ENSMUST00000117933 1000 ntBASIC11.34□□□□□ -0.59
Hcfc2Q9D968 Gm12182-201ENSMUST00000118655 1008 ntBASIC11.34□□□□□ -0.59
Hcfc2Q9D968 Gm13882-201ENSMUST00000120886 1002 ntBASIC11.34□□□□□ -0.59
Hcfc2Q9D968 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Hcfc2Q9D968 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC11.34□□□□□ -0.59
Hcfc2Q9D968 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Hcfc2Q9D968 Gm10284-201ENSMUST00000145057 1005 ntBASIC11.34□□□□□ -0.59
Hcfc2Q9D968 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hcfc2Q9D968 Gm10481-201ENSMUST00000179228 1002 ntBASIC11.34□□□□□ -0.59
Hcfc2Q9D968 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC11.34□□□□□ -0.59
Hcfc2Q9D968 Gm2574-201ENSMUST00000181051 1002 ntBASIC11.34□□□□□ -0.59
Hcfc2Q9D968 Gm3200-201ENSMUST00000181493 1002 ntBASIC11.34□□□□□ -0.59
Hcfc2Q9D968 Gm8825-201ENSMUST00000182565 998 ntBASIC11.34□□□□□ -0.59
Hcfc2Q9D968 Gm4518-201ENSMUST00000182638 718 ntBASIC11.34□□□□□ -0.59
Hcfc2Q9D968 Gm8330-201ENSMUST00000182754 1008 ntBASIC11.34□□□□□ -0.59
Hcfc2Q9D968 Gm4575-201ENSMUST00000182991 1002 ntBASIC11.34□□□□□ -0.59
Hcfc2Q9D968 Gm8709-201ENSMUST00000183230 1012 ntBASIC11.34□□□□□ -0.59
Hcfc2Q9D968 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC11.34□□□□□ -0.59
Hcfc2Q9D968 Gm30437-201ENSMUST00000206086 1201 ntBASIC11.34□□□□□ -0.59
Hcfc2Q9D968 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Hcfc2Q9D968 Gm10293-201ENSMUST00000076317 1002 ntBASIC11.34□□□□□ -0.59
Hcfc2Q9D968 Gm6316-201ENSMUST00000082064 1020 ntBASIC11.34□□□□□ -0.59
Hcfc2Q9D968 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hcfc2Q9D968 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hcfc2Q9D968 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Hcfc2Q9D968 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hcfc2Q9D968 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Hcfc2Q9D968 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Hcfc2Q9D968 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hcfc2Q9D968 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hcfc2Q9D968 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC11.34□□□□□ -0.59
Hcfc2Q9D968 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hcfc2Q9D968 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hcfc2Q9D968 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hcfc2Q9D968 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Hcfc2Q9D968 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.59
Hcfc2Q9D968 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hcfc2Q9D968 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hcfc2Q9D968 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hcfc2Q9D968 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Hcfc2Q9D968 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hcfc2Q9D968 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hcfc2Q9D968 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms