Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hdhd3Q9CYW4 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hdhd3Q9CYW4 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hdhd3Q9CYW4 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hdhd3Q9CYW4 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hdhd3Q9CYW4 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Hdhd3Q9CYW4 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hdhd3Q9CYW4 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hdhd3Q9CYW4 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hdhd3Q9CYW4 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.15□□□□□ -0.46
Hdhd3Q9CYW4 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.15□□□□□ -0.46
Hdhd3Q9CYW4 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.15□□□□□ -0.46
Hdhd3Q9CYW4 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hdhd3Q9CYW4 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hdhd3Q9CYW4 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC12.15□□□□□ -0.46
Hdhd3Q9CYW4 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hdhd3Q9CYW4 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC12.15□□□□□ -0.46
Hdhd3Q9CYW4 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hdhd3Q9CYW4 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hdhd3Q9CYW4 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hdhd3Q9CYW4 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hdhd3Q9CYW4 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hdhd3Q9CYW4 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hdhd3Q9CYW4 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hdhd3Q9CYW4 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hdhd3Q9CYW4 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hdhd3Q9CYW4 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hdhd3Q9CYW4 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Hdhd3Q9CYW4 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC12.15□□□□□ -0.46
Hdhd3Q9CYW4 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
Hdhd3Q9CYW4 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC12.15□□□□□ -0.46
Hdhd3Q9CYW4 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hdhd3Q9CYW4 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC12.15□□□□□ -0.46
Hdhd3Q9CYW4 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC12.15□□□□□ -0.46
Hdhd3Q9CYW4 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC12.15□□□□□ -0.46
Hdhd3Q9CYW4 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hdhd3Q9CYW4 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hdhd3Q9CYW4 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hdhd3Q9CYW4 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hdhd3Q9CYW4 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hdhd3Q9CYW4 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.15□□□□□ -0.46
Hdhd3Q9CYW4 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hdhd3Q9CYW4 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Hdhd3Q9CYW4 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hdhd3Q9CYW4 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Hdhd3Q9CYW4 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Hdhd3Q9CYW4 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Hdhd3Q9CYW4 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hdhd3Q9CYW4 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hdhd3Q9CYW4 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hdhd3Q9CYW4 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hdhd3Q9CYW4 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hdhd3Q9CYW4 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hdhd3Q9CYW4 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hdhd3Q9CYW4 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hdhd3Q9CYW4 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hdhd3Q9CYW4 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hdhd3Q9CYW4 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hdhd3Q9CYW4 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hdhd3Q9CYW4 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Hdhd3Q9CYW4 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Hdhd3Q9CYW4 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC12.14□□□□□ -0.47
Hdhd3Q9CYW4 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC12.14□□□□□ -0.47
Hdhd3Q9CYW4 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Hdhd3Q9CYW4 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Hdhd3Q9CYW4 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hdhd3Q9CYW4 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Hdhd3Q9CYW4 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC12.14□□□□□ -0.47
Hdhd3Q9CYW4 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hdhd3Q9CYW4 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Hdhd3Q9CYW4 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
Hdhd3Q9CYW4 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hdhd3Q9CYW4 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Hdhd3Q9CYW4 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hdhd3Q9CYW4 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.14□□□□□ -0.47
Hdhd3Q9CYW4 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hdhd3Q9CYW4 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hdhd3Q9CYW4 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hdhd3Q9CYW4 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hdhd3Q9CYW4 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hdhd3Q9CYW4 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hdhd3Q9CYW4 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hdhd3Q9CYW4 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hdhd3Q9CYW4 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hdhd3Q9CYW4 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hdhd3Q9CYW4 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hdhd3Q9CYW4 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Hdhd3Q9CYW4 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hdhd3Q9CYW4 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hdhd3Q9CYW4 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Hdhd3Q9CYW4 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hdhd3Q9CYW4 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hdhd3Q9CYW4 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Hdhd3Q9CYW4 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hdhd3Q9CYW4 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hdhd3Q9CYW4 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hdhd3Q9CYW4 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hdhd3Q9CYW4 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Hdhd3Q9CYW4 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Hdhd3Q9CYW4 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms