Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim13Q9CYB0 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Trim13Q9CYB0 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim13Q9CYB0 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trim13Q9CYB0 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim13Q9CYB0 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim13Q9CYB0 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.81□□□□□ -0.2
Trim13Q9CYB0 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim13Q9CYB0 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim13Q9CYB0 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim13Q9CYB0 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim13Q9CYB0 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim13Q9CYB0 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim13Q9CYB0 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim13Q9CYB0 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim13Q9CYB0 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim13Q9CYB0 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim13Q9CYB0 Gm11950-201ENSMUST00000121615 838 ntBASIC13.81□□□□□ -0.2
Trim13Q9CYB0 AA414768-201ENSMUST00000121924 1257 ntBASIC13.81□□□□□ -0.2
Trim13Q9CYB0 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim13Q9CYB0 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Trim13Q9CYB0 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Trim13Q9CYB0 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC13.81□□□□□ -0.2
Trim13Q9CYB0 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC13.81□□□□□ -0.2
Trim13Q9CYB0 Gm19164-201ENSMUST00000210667 640 ntBASIC13.81□□□□□ -0.2
Trim13Q9CYB0 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC13.81□□□□□ -0.2
Trim13Q9CYB0 AC127349.1-201ENSMUST00000224590 266 ntBASIC13.81□□□□□ -0.2
Trim13Q9CYB0 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim13Q9CYB0 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim13Q9CYB0 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim13Q9CYB0 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim13Q9CYB0 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Trim13Q9CYB0 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim13Q9CYB0 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim13Q9CYB0 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Trim13Q9CYB0 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim13Q9CYB0 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trim13Q9CYB0 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trim13Q9CYB0 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.81□□□□□ -0.2
Trim13Q9CYB0 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim13Q9CYB0 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim13Q9CYB0 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim13Q9CYB0 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim13Q9CYB0 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim13Q9CYB0 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim13Q9CYB0 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim13Q9CYB0 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.8□□□□□ -0.2
Trim13Q9CYB0 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim13Q9CYB0 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trim13Q9CYB0 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.8□□□□□ -0.2
Trim13Q9CYB0 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim13Q9CYB0 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim13Q9CYB0 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trim13Q9CYB0 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Trim13Q9CYB0 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim13Q9CYB0 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim13Q9CYB0 Gm15794-201ENSMUST00000120182 631 ntBASIC13.8□□□□□ -0.2
Trim13Q9CYB0 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Trim13Q9CYB0 Gm25016-201ENSMUST00000158399 131 ntBASIC13.8□□□□□ -0.2
Trim13Q9CYB0 AC153794.1-201ENSMUST00000169148 126 ntBASIC13.8□□□□□ -0.2
Trim13Q9CYB0 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.8□□□□□ -0.2
Trim13Q9CYB0 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim13Q9CYB0 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim13Q9CYB0 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim13Q9CYB0 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim13Q9CYB0 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Trim13Q9CYB0 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim13Q9CYB0 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Trim13Q9CYB0 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim13Q9CYB0 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim13Q9CYB0 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim13Q9CYB0 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim13Q9CYB0 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim13Q9CYB0 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim13Q9CYB0 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim13Q9CYB0 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim13Q9CYB0 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim13Q9CYB0 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim13Q9CYB0 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim13Q9CYB0 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim13Q9CYB0 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim13Q9CYB0 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim13Q9CYB0 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim13Q9CYB0 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Trim13Q9CYB0 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim13Q9CYB0 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Trim13Q9CYB0 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim13Q9CYB0 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.79□□□□□ -0.2
Trim13Q9CYB0 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Trim13Q9CYB0 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim13Q9CYB0 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Trim13Q9CYB0 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.79□□□□□ -0.2
Trim13Q9CYB0 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim13Q9CYB0 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim13Q9CYB0 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Trim13Q9CYB0 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim13Q9CYB0 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
Trim13Q9CYB0 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim13Q9CYB0 Ighv6-1-201ENSMUST00000193612 343 ntBASIC13.79□□□□□ -0.2
Trim13Q9CYB0 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms