Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Gm29361-201ENSMUST00000183323 2000 ntBASIC17.56■□□□□ 0.4
Smc3Q9CW03 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Smc3Q9CW03 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smc3Q9CW03 Gm18489-201ENSMUST00000172565 551 ntBASIC17.56■□□□□ 0.4
Smc3Q9CW03 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.56■□□□□ 0.4
Smc3Q9CW03 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Smc3Q9CW03 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC17.56■□□□□ 0.4
Smc3Q9CW03 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Smc3Q9CW03 AC151836.1-202ENSMUST00000226259 753 ntBASIC17.56■□□□□ 0.4
Smc3Q9CW03 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smc3Q9CW03 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smc3Q9CW03 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smc3Q9CW03 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smc3Q9CW03 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Smc3Q9CW03 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smc3Q9CW03 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smc3Q9CW03 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smc3Q9CW03 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smc3Q9CW03 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Smc3Q9CW03 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smc3Q9CW03 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Smc3Q9CW03 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Smc3Q9CW03 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smc3Q9CW03 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smc3Q9CW03 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smc3Q9CW03 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC17.55■□□□□ 0.4
Smc3Q9CW03 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Smc3Q9CW03 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC17.55■□□□□ 0.4
Smc3Q9CW03 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC17.55■□□□□ 0.4
Smc3Q9CW03 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Smc3Q9CW03 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Smc3Q9CW03 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Smc3Q9CW03 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Smc3Q9CW03 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Smc3Q9CW03 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.55■□□□□ 0.4
Smc3Q9CW03 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC17.55■□□□□ 0.4
Smc3Q9CW03 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Smc3Q9CW03 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Smc3Q9CW03 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smc3Q9CW03 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Smc3Q9CW03 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smc3Q9CW03 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smc3Q9CW03 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Smc3Q9CW03 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smc3Q9CW03 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smc3Q9CW03 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smc3Q9CW03 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Smc3Q9CW03 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Smc3Q9CW03 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smc3Q9CW03 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smc3Q9CW03 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smc3Q9CW03 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Smc3Q9CW03 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Smc3Q9CW03 Gm3928-201ENSMUST00000121141 1307 ntBASIC17.54■□□□□ 0.4
Smc3Q9CW03 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smc3Q9CW03 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Smc3Q9CW03 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smc3Q9CW03 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Smc3Q9CW03 Gm6089-201ENSMUST00000197666 938 ntBASIC17.54■□□□□ 0.4
Smc3Q9CW03 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smc3Q9CW03 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smc3Q9CW03 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smc3Q9CW03 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smc3Q9CW03 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Smc3Q9CW03 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Smc3Q9CW03 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smc3Q9CW03 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Smc3Q9CW03 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
Smc3Q9CW03 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Smc3Q9CW03 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smc3Q9CW03 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
Smc3Q9CW03 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Smc3Q9CW03 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Smc3Q9CW03 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Smc3Q9CW03 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Smc3Q9CW03 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smc3Q9CW03 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC17.53■□□□□ 0.4
Smc3Q9CW03 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smc3Q9CW03 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smc3Q9CW03 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smc3Q9CW03 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smc3Q9CW03 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smc3Q9CW03 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.53■□□□□ 0.4
Smc3Q9CW03 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC17.53■□□□□ 0.4
Smc3Q9CW03 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC17.53■□□□□ 0.4
Smc3Q9CW03 Gm28033-201ENSMUST00000184224 96 ntBASIC17.53■□□□□ 0.4
Smc3Q9CW03 Gm5253-201ENSMUST00000187104 1025 ntBASIC17.53■□□□□ 0.4
Smc3Q9CW03 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC17.53■□□□□ 0.4
Smc3Q9CW03 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.53■□□□□ 0.4
Smc3Q9CW03 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smc3Q9CW03 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Smc3Q9CW03 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smc3Q9CW03 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smc3Q9CW03 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC17.53■□□□□ 0.4
Smc3Q9CW03 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smc3Q9CW03 Gm37500-201ENSMUST00000192059 1443 ntBASIC17.53■□□□□ 0.4
Smc3Q9CW03 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Smc3Q9CW03 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smc3Q9CW03 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smc3Q9CW03 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms