Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cldnd1Q9CQX5 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cldnd1Q9CQX5 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cldnd1Q9CQX5 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cldnd1Q9CQX5 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cldnd1Q9CQX5 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cldnd1Q9CQX5 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cldnd1Q9CQX5 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cldnd1Q9CQX5 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Cldnd1Q9CQX5 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.18■□□□□ 0.02
Cldnd1Q9CQX5 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cldnd1Q9CQX5 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cldnd1Q9CQX5 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cldnd1Q9CQX5 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Cldnd1Q9CQX5 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cldnd1Q9CQX5 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC15.18■□□□□ 0.02
Cldnd1Q9CQX5 Gm6944-201ENSMUST00000182449 1006 ntBASIC15.18■□□□□ 0.02
Cldnd1Q9CQX5 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cldnd1Q9CQX5 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cldnd1Q9CQX5 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Cldnd1Q9CQX5 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cldnd1Q9CQX5 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cldnd1Q9CQX5 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cldnd1Q9CQX5 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cldnd1Q9CQX5 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cldnd1Q9CQX5 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cldnd1Q9CQX5 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Cldnd1Q9CQX5 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cldnd1Q9CQX5 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cldnd1Q9CQX5 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cldnd1Q9CQX5 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cldnd1Q9CQX5 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cldnd1Q9CQX5 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cldnd1Q9CQX5 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cldnd1Q9CQX5 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cldnd1Q9CQX5 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC15.17■□□□□ 0.02
Cldnd1Q9CQX5 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cldnd1Q9CQX5 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cldnd1Q9CQX5 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cldnd1Q9CQX5 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Cldnd1Q9CQX5 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cldnd1Q9CQX5 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cldnd1Q9CQX5 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cldnd1Q9CQX5 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cldnd1Q9CQX5 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cldnd1Q9CQX5 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Cldnd1Q9CQX5 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cldnd1Q9CQX5 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.17■□□□□ 0.02
Cldnd1Q9CQX5 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Cldnd1Q9CQX5 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC15.17■□□□□ 0.02
Cldnd1Q9CQX5 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC15.17■□□□□ 0.02
Cldnd1Q9CQX5 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC15.17■□□□□ 0.02
Cldnd1Q9CQX5 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC15.17■□□□□ 0.02
Cldnd1Q9CQX5 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Cldnd1Q9CQX5 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cldnd1Q9CQX5 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cldnd1Q9CQX5 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC15.17■□□□□ 0.02
Cldnd1Q9CQX5 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cldnd1Q9CQX5 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cldnd1Q9CQX5 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Cldnd1Q9CQX5 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cldnd1Q9CQX5 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cldnd1Q9CQX5 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cldnd1Q9CQX5 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cldnd1Q9CQX5 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cldnd1Q9CQX5 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cldnd1Q9CQX5 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cldnd1Q9CQX5 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cldnd1Q9CQX5 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Cldnd1Q9CQX5 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC15.17■□□□□ 0.02
Cldnd1Q9CQX5 Celf4-206ENSMUST00000224553 1729 ntBASIC15.17■□□□□ 0.02
Cldnd1Q9CQX5 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cldnd1Q9CQX5 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cldnd1Q9CQX5 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cldnd1Q9CQX5 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cldnd1Q9CQX5 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cldnd1Q9CQX5 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cldnd1Q9CQX5 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cldnd1Q9CQX5 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cldnd1Q9CQX5 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cldnd1Q9CQX5 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cldnd1Q9CQX5 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cldnd1Q9CQX5 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Cldnd1Q9CQX5 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cldnd1Q9CQX5 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Cldnd1Q9CQX5 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cldnd1Q9CQX5 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.16■□□□□ 0.02
Cldnd1Q9CQX5 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cldnd1Q9CQX5 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cldnd1Q9CQX5 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.16■□□□□ 0.02
Cldnd1Q9CQX5 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC15.16■□□□□ 0.02
Cldnd1Q9CQX5 Gm11425-201ENSMUST00000119608 498 ntBASIC15.16■□□□□ 0.02
Cldnd1Q9CQX5 Gm12960-201ENSMUST00000120017 1066 ntBASIC15.16■□□□□ 0.02
Cldnd1Q9CQX5 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC15.16■□□□□ 0.02
Cldnd1Q9CQX5 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cldnd1Q9CQX5 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC15.16■□□□□ 0.02
Cldnd1Q9CQX5 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Cldnd1Q9CQX5 Gm9002-201ENSMUST00000178437 499 ntBASIC15.16■□□□□ 0.02
Cldnd1Q9CQX5 AY702102-202ENSMUST00000194651 1173 ntBASIC15.16■□□□□ 0.02
Cldnd1Q9CQX5 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms