Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Retreg3Q9CQV4 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Retreg3Q9CQV4 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.05■□□□□ 0
Retreg3Q9CQV4 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15.05■□□□□ 0
Retreg3Q9CQV4 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.05■□□□□ 0
Retreg3Q9CQV4 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Retreg3Q9CQV4 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Retreg3Q9CQV4 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Retreg3Q9CQV4 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC15.05■□□□□ -0
Retreg3Q9CQV4 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Retreg3Q9CQV4 Gm5177-201ENSMUST00000183092 997 ntBASIC15.05■□□□□ -0
Retreg3Q9CQV4 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC15.05■□□□□ -0
Retreg3Q9CQV4 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.05■□□□□ -0
Retreg3Q9CQV4 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Retreg3Q9CQV4 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Retreg3Q9CQV4 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.05■□□□□ -0
Retreg3Q9CQV4 Gm10313-201ENSMUST00000095320 1002 ntBASIC15.05■□□□□ -0
Retreg3Q9CQV4 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Retreg3Q9CQV4 Sybu-209ENSMUST00000228639 4113 ntBASIC15.05■□□□□ -0
Retreg3Q9CQV4 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
Retreg3Q9CQV4 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Retreg3Q9CQV4 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Retreg3Q9CQV4 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Retreg3Q9CQV4 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.05■□□□□ -0
Retreg3Q9CQV4 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.05■□□□□ -0
Retreg3Q9CQV4 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
Retreg3Q9CQV4 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Retreg3Q9CQV4 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Retreg3Q9CQV4 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Retreg3Q9CQV4 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Retreg3Q9CQV4 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Retreg3Q9CQV4 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.04■□□□□ -0
Retreg3Q9CQV4 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.04■□□□□ -0
Retreg3Q9CQV4 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retreg3Q9CQV4 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retreg3Q9CQV4 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.04■□□□□ -0
Retreg3Q9CQV4 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC15.04■□□□□ -0
Retreg3Q9CQV4 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retreg3Q9CQV4 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Retreg3Q9CQV4 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retreg3Q9CQV4 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC15.04■□□□□ -0
Retreg3Q9CQV4 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC15.04■□□□□ -0
Retreg3Q9CQV4 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Retreg3Q9CQV4 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC15.04■□□□□ -0
Retreg3Q9CQV4 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC15.04■□□□□ -0
Retreg3Q9CQV4 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC15.04■□□□□ -0
Retreg3Q9CQV4 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
Retreg3Q9CQV4 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC15.04■□□□□ -0
Retreg3Q9CQV4 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC15.04■□□□□ -0
Retreg3Q9CQV4 Gm22993-201ENSMUST00000175423 254 ntBASIC15.04■□□□□ -0
Retreg3Q9CQV4 Gm29013-201ENSMUST00000187431 237 ntBASIC15.04■□□□□ -0
Retreg3Q9CQV4 Gm45747-201ENSMUST00000212203 999 ntBASIC15.04■□□□□ -0
Retreg3Q9CQV4 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC15.04■□□□□ -0
Retreg3Q9CQV4 CT009754.4-201ENSMUST00000221430 565 ntBASIC15.04■□□□□ -0
Retreg3Q9CQV4 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retreg3Q9CQV4 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Retreg3Q9CQV4 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retreg3Q9CQV4 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retreg3Q9CQV4 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retreg3Q9CQV4 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Retreg3Q9CQV4 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retreg3Q9CQV4 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retreg3Q9CQV4 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retreg3Q9CQV4 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Retreg3Q9CQV4 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.03■□□□□ -0
Retreg3Q9CQV4 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC15.03■□□□□ -0
Retreg3Q9CQV4 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Retreg3Q9CQV4 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC15.03■□□□□ -0
Retreg3Q9CQV4 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC15.03■□□□□ -0
Retreg3Q9CQV4 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Retreg3Q9CQV4 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Retreg3Q9CQV4 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.03■□□□□ -0
Retreg3Q9CQV4 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.03■□□□□ -0
Retreg3Q9CQV4 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Retreg3Q9CQV4 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Retreg3Q9CQV4 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC15.03■□□□□ -0
Retreg3Q9CQV4 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Retreg3Q9CQV4 Gm14740-201ENSMUST00000118538 1150 ntBASIC15.03■□□□□ -0
Retreg3Q9CQV4 Gm16198-201ENSMUST00000118766 670 ntBASIC15.03■□□□□ -0
Retreg3Q9CQV4 Gm28722-201ENSMUST00000187630 1036 ntTSL 1 (best) BASIC15.03■□□□□ -0
Retreg3Q9CQV4 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC15.03■□□□□ -0
Retreg3Q9CQV4 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Retreg3Q9CQV4 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Retreg3Q9CQV4 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC15.03■□□□□ -0
Retreg3Q9CQV4 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Retreg3Q9CQV4 Camk2g-217ENSMUST00000226630 1937 ntBASIC15.03■□□□□ -0
Retreg3Q9CQV4 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Retreg3Q9CQV4 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.03■□□□□ -0
Retreg3Q9CQV4 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.03■□□□□ -0
Retreg3Q9CQV4 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Retreg3Q9CQV4 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Retreg3Q9CQV4 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Retreg3Q9CQV4 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Retreg3Q9CQV4 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Retreg3Q9CQV4 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Retreg3Q9CQV4 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
Retreg3Q9CQV4 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC15.02■□□□□ -0
Retreg3Q9CQV4 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.02■□□□□ -0
Retreg3Q9CQV4 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Retreg3Q9CQV4 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.02■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms