Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.04■□□□□ -0
Lsm7Q9CQQ8 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Lsm7Q9CQQ8 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC15.04■□□□□ -0
Lsm7Q9CQQ8 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC15.04■□□□□ -0
Lsm7Q9CQQ8 Gm7774-201ENSMUST00000200064 533 ntBASIC15.04■□□□□ -0
Lsm7Q9CQQ8 Gm44872-201ENSMUST00000207864 420 ntBASIC15.04■□□□□ -0
Lsm7Q9CQQ8 AC166341.4-201ENSMUST00000220625 123 ntBASIC15.04■□□□□ -0
Lsm7Q9CQQ8 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC15.04■□□□□ -0
Lsm7Q9CQQ8 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Lsm7Q9CQQ8 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Lsm7Q9CQQ8 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Lsm7Q9CQQ8 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Lsm7Q9CQQ8 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Lsm7Q9CQQ8 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Lsm7Q9CQQ8 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.04■□□□□ -0
Lsm7Q9CQQ8 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Lsm7Q9CQQ8 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC15.03■□□□□ -0
Lsm7Q9CQQ8 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Lsm7Q9CQQ8 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC15.03■□□□□ -0
Lsm7Q9CQQ8 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Lsm7Q9CQQ8 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.03■□□□□ -0
Lsm7Q9CQQ8 CT025626.1-201ENSMUST00000223735 1455 ntBASIC15.03■□□□□ -0
Lsm7Q9CQQ8 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Lsm7Q9CQQ8 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC15.03■□□□□ -0
Lsm7Q9CQQ8 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Lsm7Q9CQQ8 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Lsm7Q9CQQ8 Gm25287-201ENSMUST00000103846 110 ntBASIC15.03■□□□□ -0
Lsm7Q9CQQ8 Gm22918-201ENSMUST00000103855 110 ntBASIC15.03■□□□□ -0
Lsm7Q9CQQ8 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC15.03■□□□□ -0
Lsm7Q9CQQ8 Gm13616-201ENSMUST00000120600 222 ntBASIC15.03■□□□□ -0
Lsm7Q9CQQ8 Gm10253-201ENSMUST00000194270 940 ntBASIC15.03■□□□□ -0
Lsm7Q9CQQ8 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Lsm7Q9CQQ8 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC15.03■□□□□ -0
Lsm7Q9CQQ8 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Lsm7Q9CQQ8 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Lsm7Q9CQQ8 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Lsm7Q9CQQ8 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Lsm7Q9CQQ8 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Lsm7Q9CQQ8 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Lsm7Q9CQQ8 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC15.03■□□□□ -0
Lsm7Q9CQQ8 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Lsm7Q9CQQ8 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.03■□□□□ -0
Lsm7Q9CQQ8 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC15.03■□□□□ -0
Lsm7Q9CQQ8 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Lsm7Q9CQQ8 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Lsm7Q9CQQ8 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Lsm7Q9CQQ8 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Lsm7Q9CQQ8 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Lsm7Q9CQQ8 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Lsm7Q9CQQ8 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.02■□□□□ -0
Lsm7Q9CQQ8 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Lsm7Q9CQQ8 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Lsm7Q9CQQ8 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC15.02■□□□□ -0
Lsm7Q9CQQ8 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Lsm7Q9CQQ8 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
Lsm7Q9CQQ8 Fgf17-202ENSMUST00000227123 1336 ntBASIC15.02■□□□□ -0
Lsm7Q9CQQ8 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Lsm7Q9CQQ8 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Lsm7Q9CQQ8 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Lsm7Q9CQQ8 Gm2810-201ENSMUST00000118681 990 ntBASIC15.02■□□□□ -0
Lsm7Q9CQQ8 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC15.02■□□□□ -0
Lsm7Q9CQQ8 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC15.02■□□□□ -0
Lsm7Q9CQQ8 Gm38225-201ENSMUST00000194001 393 ntBASIC15.02■□□□□ -0
Lsm7Q9CQQ8 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC15.02■□□□□ -0
Lsm7Q9CQQ8 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC15.02■□□□□ -0
Lsm7Q9CQQ8 AC131187.1-201ENSMUST00000224567 809 ntBASIC15.02■□□□□ -0
Lsm7Q9CQQ8 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Lsm7Q9CQQ8 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Lsm7Q9CQQ8 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Lsm7Q9CQQ8 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Lsm7Q9CQQ8 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Lsm7Q9CQQ8 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Lsm7Q9CQQ8 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
Lsm7Q9CQQ8 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Lsm7Q9CQQ8 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Lsm7Q9CQQ8 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.02□□□□□ -0.01
Lsm7Q9CQQ8 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lsm7Q9CQQ8 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Lsm7Q9CQQ8 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lsm7Q9CQQ8 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lsm7Q9CQQ8 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Lsm7Q9CQQ8 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lsm7Q9CQQ8 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lsm7Q9CQQ8 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.01□□□□□ -0.01
Lsm7Q9CQQ8 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lsm7Q9CQQ8 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lsm7Q9CQQ8 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Lsm7Q9CQQ8 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lsm7Q9CQQ8 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lsm7Q9CQQ8 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lsm7Q9CQQ8 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.01□□□□□ -0.01
Lsm7Q9CQQ8 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Lsm7Q9CQQ8 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lsm7Q9CQQ8 Gm22065-201ENSMUST00000103753 110 ntBASIC15.01□□□□□ -0.01
Lsm7Q9CQQ8 Gm22066-201ENSMUST00000103761 110 ntBASIC15.01□□□□□ -0.01
Lsm7Q9CQQ8 Gm24932-201ENSMUST00000103763 110 ntBASIC15.01□□□□□ -0.01
Lsm7Q9CQQ8 Gm24115-201ENSMUST00000103799 110 ntBASIC15.01□□□□□ -0.01
Lsm7Q9CQQ8 Gm22190-201ENSMUST00000103827 110 ntBASIC15.01□□□□□ -0.01
Lsm7Q9CQQ8 Gm22191-201ENSMUST00000103831 110 ntBASIC15.01□□□□□ -0.01
Lsm7Q9CQQ8 Gm24721-201ENSMUST00000103849 110 ntBASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms