Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.16□□□□□ -0.46
RTRAFQ9CQE8 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RTRAFQ9CQE8 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RTRAFQ9CQE8 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
RTRAFQ9CQE8 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RTRAFQ9CQE8 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RTRAFQ9CQE8 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
RTRAFQ9CQE8 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RTRAFQ9CQE8 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RTRAFQ9CQE8 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RTRAFQ9CQE8 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
RTRAFQ9CQE8 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RTRAFQ9CQE8 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RTRAFQ9CQE8 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
RTRAFQ9CQE8 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
RTRAFQ9CQE8 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.15□□□□□ -0.46
RTRAFQ9CQE8 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.15□□□□□ -0.46
RTRAFQ9CQE8 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RTRAFQ9CQE8 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
RTRAFQ9CQE8 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
RTRAFQ9CQE8 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
RTRAFQ9CQE8 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
RTRAFQ9CQE8 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RTRAFQ9CQE8 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC12.15□□□□□ -0.46
RTRAFQ9CQE8 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RTRAFQ9CQE8 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RTRAFQ9CQE8 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
RTRAFQ9CQE8 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
RTRAFQ9CQE8 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
RTRAFQ9CQE8 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
RTRAFQ9CQE8 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RTRAFQ9CQE8 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RTRAFQ9CQE8 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RTRAFQ9CQE8 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
RTRAFQ9CQE8 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RTRAFQ9CQE8 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RTRAFQ9CQE8 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.15□□□□□ -0.46
RTRAFQ9CQE8 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RTRAFQ9CQE8 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
RTRAFQ9CQE8 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
RTRAFQ9CQE8 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RTRAFQ9CQE8 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
RTRAFQ9CQE8 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
RTRAFQ9CQE8 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
RTRAFQ9CQE8 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RTRAFQ9CQE8 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RTRAFQ9CQE8 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RTRAFQ9CQE8 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RTRAFQ9CQE8 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
RTRAFQ9CQE8 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
RTRAFQ9CQE8 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RTRAFQ9CQE8 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
RTRAFQ9CQE8 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
RTRAFQ9CQE8 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
RTRAFQ9CQE8 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RTRAFQ9CQE8 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RTRAFQ9CQE8 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
RTRAFQ9CQE8 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RTRAFQ9CQE8 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RTRAFQ9CQE8 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
RTRAFQ9CQE8 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.14□□□□□ -0.47
RTRAFQ9CQE8 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC12.14□□□□□ -0.47
RTRAFQ9CQE8 Gm715-201ENSMUST00000117865 831 ntBASIC12.14□□□□□ -0.47
RTRAFQ9CQE8 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC12.14□□□□□ -0.47
RTRAFQ9CQE8 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC12.14□□□□□ -0.47
RTRAFQ9CQE8 Gm44430-201ENSMUST00000203376 995 ntBASIC12.14□□□□□ -0.47
RTRAFQ9CQE8 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RTRAFQ9CQE8 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RTRAFQ9CQE8 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RTRAFQ9CQE8 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RTRAFQ9CQE8 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
RTRAFQ9CQE8 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.14□□□□□ -0.47
RTRAFQ9CQE8 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
RTRAFQ9CQE8 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RTRAFQ9CQE8 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.14□□□□□ -0.47
RTRAFQ9CQE8 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RTRAFQ9CQE8 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
RTRAFQ9CQE8 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
RTRAFQ9CQE8 Gm13337-201ENSMUST00000119183 1594 ntBASIC12.13□□□□□ -0.47
RTRAFQ9CQE8 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
RTRAFQ9CQE8 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RTRAFQ9CQE8 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RTRAFQ9CQE8 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RTRAFQ9CQE8 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.13□□□□□ -0.47
RTRAFQ9CQE8 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
RTRAFQ9CQE8 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RTRAFQ9CQE8 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
RTRAFQ9CQE8 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
RTRAFQ9CQE8 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
RTRAFQ9CQE8 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC12.13□□□□□ -0.47
RTRAFQ9CQE8 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
RTRAFQ9CQE8 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC12.13□□□□□ -0.47
RTRAFQ9CQE8 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC12.13□□□□□ -0.47
RTRAFQ9CQE8 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RTRAFQ9CQE8 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC12.13□□□□□ -0.47
RTRAFQ9CQE8 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC12.13□□□□□ -0.47
RTRAFQ9CQE8 AC135963.1-201ENSMUST00000211640 717 ntBASIC12.13□□□□□ -0.47
RTRAFQ9CQE8 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RTRAFQ9CQE8 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
RTRAFQ9CQE8 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms