Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
H2afb1Q9CQ70 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
H2afb1Q9CQ70 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.21□□□□□ -0.45
H2afb1Q9CQ70 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
H2afb1Q9CQ70 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
H2afb1Q9CQ70 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
H2afb1Q9CQ70 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
H2afb1Q9CQ70 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
H2afb1Q9CQ70 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
H2afb1Q9CQ70 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC12.21□□□□□ -0.45
H2afb1Q9CQ70 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
H2afb1Q9CQ70 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC12.21□□□□□ -0.45
H2afb1Q9CQ70 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC12.21□□□□□ -0.45
H2afb1Q9CQ70 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
H2afb1Q9CQ70 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC12.21□□□□□ -0.45
H2afb1Q9CQ70 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC12.21□□□□□ -0.45
H2afb1Q9CQ70 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
H2afb1Q9CQ70 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
H2afb1Q9CQ70 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
H2afb1Q9CQ70 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
H2afb1Q9CQ70 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
H2afb1Q9CQ70 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
H2afb1Q9CQ70 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
H2afb1Q9CQ70 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.21□□□□□ -0.46
H2afb1Q9CQ70 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
H2afb1Q9CQ70 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
H2afb1Q9CQ70 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
H2afb1Q9CQ70 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
H2afb1Q9CQ70 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
H2afb1Q9CQ70 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
H2afb1Q9CQ70 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.46
H2afb1Q9CQ70 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb1Q9CQ70 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb1Q9CQ70 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb1Q9CQ70 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb1Q9CQ70 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
H2afb1Q9CQ70 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
H2afb1Q9CQ70 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb1Q9CQ70 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb1Q9CQ70 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb1Q9CQ70 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb1Q9CQ70 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
H2afb1Q9CQ70 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb1Q9CQ70 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
H2afb1Q9CQ70 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb1Q9CQ70 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
H2afb1Q9CQ70 Gm24589-201ENSMUST00000116692 94 ntBASIC12.2□□□□□ -0.46
H2afb1Q9CQ70 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC12.2□□□□□ -0.46
H2afb1Q9CQ70 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb1Q9CQ70 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
H2afb1Q9CQ70 Gm6550-201ENSMUST00000187574 993 ntBASIC12.2□□□□□ -0.46
H2afb1Q9CQ70 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb1Q9CQ70 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb1Q9CQ70 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb1Q9CQ70 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb1Q9CQ70 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb1Q9CQ70 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb1Q9CQ70 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb1Q9CQ70 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb1Q9CQ70 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb1Q9CQ70 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb1Q9CQ70 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb1Q9CQ70 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
H2afb1Q9CQ70 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb1Q9CQ70 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb1Q9CQ70 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb1Q9CQ70 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb1Q9CQ70 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.2□□□□□ -0.46
H2afb1Q9CQ70 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
H2afb1Q9CQ70 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb1Q9CQ70 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb1Q9CQ70 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb1Q9CQ70 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb1Q9CQ70 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb1Q9CQ70 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb1Q9CQ70 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb1Q9CQ70 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb1Q9CQ70 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12.19□□□□□ -0.46
H2afb1Q9CQ70 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb1Q9CQ70 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb1Q9CQ70 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb1Q9CQ70 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
H2afb1Q9CQ70 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb1Q9CQ70 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb1Q9CQ70 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
H2afb1Q9CQ70 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb1Q9CQ70 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb1Q9CQ70 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb1Q9CQ70 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb1Q9CQ70 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb1Q9CQ70 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb1Q9CQ70 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.19□□□□□ -0.46
H2afb1Q9CQ70 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb1Q9CQ70 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb1Q9CQ70 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
H2afb1Q9CQ70 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb1Q9CQ70 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb1Q9CQ70 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb1Q9CQ70 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb1Q9CQ70 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms