Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim11Q99PQ2 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.99■□□□□ 0.31
Trim11Q99PQ2 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim11Q99PQ2 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Trim11Q99PQ2 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trim11Q99PQ2 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim11Q99PQ2 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim11Q99PQ2 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim11Q99PQ2 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trim11Q99PQ2 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trim11Q99PQ2 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trim11Q99PQ2 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trim11Q99PQ2 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim11Q99PQ2 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Trim11Q99PQ2 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim11Q99PQ2 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim11Q99PQ2 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim11Q99PQ2 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim11Q99PQ2 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim11Q99PQ2 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim11Q99PQ2 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trim11Q99PQ2 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trim11Q99PQ2 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trim11Q99PQ2 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim11Q99PQ2 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trim11Q99PQ2 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trim11Q99PQ2 AC119177.1-201ENSMUST00000227647 1332 ntBASIC16.98■□□□□ 0.31
Trim11Q99PQ2 Fbxl12-205ENSMUST00000140702 1555 ntBASIC16.98■□□□□ 0.31
Trim11Q99PQ2 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim11Q99PQ2 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim11Q99PQ2 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim11Q99PQ2 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Trim11Q99PQ2 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC16.98■□□□□ 0.31
Trim11Q99PQ2 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trim11Q99PQ2 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim11Q99PQ2 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim11Q99PQ2 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim11Q99PQ2 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim11Q99PQ2 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC16.98■□□□□ 0.31
Trim11Q99PQ2 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trim11Q99PQ2 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC16.98■□□□□ 0.31
Trim11Q99PQ2 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim11Q99PQ2 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim11Q99PQ2 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim11Q99PQ2 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trim11Q99PQ2 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Trim11Q99PQ2 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim11Q99PQ2 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim11Q99PQ2 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim11Q99PQ2 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trim11Q99PQ2 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim11Q99PQ2 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim11Q99PQ2 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim11Q99PQ2 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim11Q99PQ2 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim11Q99PQ2 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim11Q99PQ2 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trim11Q99PQ2 Gm10605-202ENSMUST00000183019 3198 ntBASIC16.97■□□□□ 0.31
Trim11Q99PQ2 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim11Q99PQ2 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim11Q99PQ2 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
Trim11Q99PQ2 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Trim11Q99PQ2 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trim11Q99PQ2 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim11Q99PQ2 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim11Q99PQ2 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim11Q99PQ2 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim11Q99PQ2 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim11Q99PQ2 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim11Q99PQ2 Gm13036-201ENSMUST00000117799 748 ntBASIC16.97■□□□□ 0.31
Trim11Q99PQ2 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim11Q99PQ2 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trim11Q99PQ2 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trim11Q99PQ2 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC16.97■□□□□ 0.31
Trim11Q99PQ2 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim11Q99PQ2 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim11Q99PQ2 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim11Q99PQ2 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC16.97■□□□□ 0.31
Trim11Q99PQ2 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim11Q99PQ2 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim11Q99PQ2 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim11Q99PQ2 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim11Q99PQ2 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim11Q99PQ2 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC16.97■□□□□ 0.31
Trim11Q99PQ2 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC16.97■□□□□ 0.31
Trim11Q99PQ2 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Trim11Q99PQ2 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trim11Q99PQ2 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC16.96■□□□□ 0.31
Trim11Q99PQ2 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC16.96■□□□□ 0.31
Trim11Q99PQ2 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim11Q99PQ2 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim11Q99PQ2 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim11Q99PQ2 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim11Q99PQ2 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim11Q99PQ2 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trim11Q99PQ2 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.96■□□□□ 0.31
Trim11Q99PQ2 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trim11Q99PQ2 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim11Q99PQ2 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim11Q99PQ2 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms