Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rtn4Q99P72 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rtn4Q99P72 Gm26308-201ENSMUST00000157768 69 ntBASIC19.16■□□□□ 0.66
Rtn4Q99P72 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rtn4Q99P72 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Rtn4Q99P72 Gm44945-201ENSMUST00000206764 1187 ntBASIC19.16■□□□□ 0.66
Rtn4Q99P72 AC132881.2-201ENSMUST00000225474 709 ntBASIC19.16■□□□□ 0.66
Rtn4Q99P72 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rtn4Q99P72 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rtn4Q99P72 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
Rtn4Q99P72 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rtn4Q99P72 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
Rtn4Q99P72 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rtn4Q99P72 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rtn4Q99P72 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rtn4Q99P72 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rtn4Q99P72 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rtn4Q99P72 Rbfox2-206ENSMUST00000227314 1810 ntBASIC19.16■□□□□ 0.66
Rtn4Q99P72 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rtn4Q99P72 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rtn4Q99P72 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rtn4Q99P72 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC19.16■□□□□ 0.66
Rtn4Q99P72 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rtn4Q99P72 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rtn4Q99P72 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rtn4Q99P72 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rtn4Q99P72 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rtn4Q99P72 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Rtn4Q99P72 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rtn4Q99P72 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rtn4Q99P72 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rtn4Q99P72 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rtn4Q99P72 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rtn4Q99P72 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Rtn4Q99P72 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rtn4Q99P72 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rtn4Q99P72 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Rtn4Q99P72 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
Rtn4Q99P72 Gm12467-201ENSMUST00000117625 745 ntBASIC19.15■□□□□ 0.66
Rtn4Q99P72 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC19.15■□□□□ 0.66
Rtn4Q99P72 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rtn4Q99P72 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rtn4Q99P72 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC19.15■□□□□ 0.66
Rtn4Q99P72 Gm6649-201ENSMUST00000199743 1165 ntBASIC19.15■□□□□ 0.66
Rtn4Q99P72 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rtn4Q99P72 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Rtn4Q99P72 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC19.15■□□□□ 0.66
Rtn4Q99P72 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rtn4Q99P72 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rtn4Q99P72 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rtn4Q99P72 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rtn4Q99P72 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rtn4Q99P72 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rtn4Q99P72 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rtn4Q99P72 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Rtn4Q99P72 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rtn4Q99P72 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Rtn4Q99P72 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rtn4Q99P72 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Rtn4Q99P72 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Rtn4Q99P72 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Rtn4Q99P72 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rtn4Q99P72 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Rtn4Q99P72 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Rtn4Q99P72 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC19.14■□□□□ 0.65
Rtn4Q99P72 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rtn4Q99P72 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rtn4Q99P72 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Rtn4Q99P72 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Rtn4Q99P72 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC19.14■□□□□ 0.65
Rtn4Q99P72 Gm44492-201ENSMUST00000197012 141 ntBASIC19.14■□□□□ 0.65
Rtn4Q99P72 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC19.14■□□□□ 0.65
Rtn4Q99P72 1700011I03Rik-201ENSMUST00000079738 1013 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rtn4Q99P72 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Rtn4Q99P72 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rtn4Q99P72 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rtn4Q99P72 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rtn4Q99P72 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rtn4Q99P72 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Rtn4Q99P72 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rtn4Q99P72 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rtn4Q99P72 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rtn4Q99P72 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC19.13■□□□□ 0.65
Rtn4Q99P72 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rtn4Q99P72 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rtn4Q99P72 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rtn4Q99P72 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rtn4Q99P72 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Rtn4Q99P72 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rtn4Q99P72 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rtn4Q99P72 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Rtn4Q99P72 Tcrg-C4-201ENSMUST00000179181 985 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Rtn4Q99P72 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC19.13■□□□□ 0.65
Rtn4Q99P72 Rpp30-201ENSMUST00000025714 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rtn4Q99P72 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rtn4Q99P72 Snapc5-201ENSMUST00000034965 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rtn4Q99P72 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rtn4Q99P72 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rtn4Q99P72 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rtn4Q99P72 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms