Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Nkd1Q99MH6 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.08□□□□□ -0.15
Nkd1Q99MH6 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nkd1Q99MH6 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nkd1Q99MH6 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nkd1Q99MH6 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nkd1Q99MH6 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nkd1Q99MH6 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nkd1Q99MH6 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkd1Q99MH6 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkd1Q99MH6 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.08□□□□□ -0.16
Nkd1Q99MH6 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkd1Q99MH6 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkd1Q99MH6 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkd1Q99MH6 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkd1Q99MH6 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.08□□□□□ -0.16
Nkd1Q99MH6 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkd1Q99MH6 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Nkd1Q99MH6 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Nkd1Q99MH6 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.08□□□□□ -0.16
Nkd1Q99MH6 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.08□□□□□ -0.16
Nkd1Q99MH6 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkd1Q99MH6 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkd1Q99MH6 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Nkd1Q99MH6 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkd1Q99MH6 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkd1Q99MH6 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkd1Q99MH6 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkd1Q99MH6 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkd1Q99MH6 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.08□□□□□ -0.16
Nkd1Q99MH6 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkd1Q99MH6 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkd1Q99MH6 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkd1Q99MH6 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkd1Q99MH6 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkd1Q99MH6 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Nkd1Q99MH6 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkd1Q99MH6 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkd1Q99MH6 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkd1Q99MH6 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkd1Q99MH6 Celf4-206ENSMUST00000224553 1729 ntBASIC14.07□□□□□ -0.16
Nkd1Q99MH6 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkd1Q99MH6 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkd1Q99MH6 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkd1Q99MH6 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkd1Q99MH6 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nkd1Q99MH6 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nkd1Q99MH6 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC14.07□□□□□ -0.16
Nkd1Q99MH6 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkd1Q99MH6 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.07□□□□□ -0.16
Nkd1Q99MH6 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkd1Q99MH6 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Nkd1Q99MH6 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkd1Q99MH6 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.07□□□□□ -0.16
Nkd1Q99MH6 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Nkd1Q99MH6 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nkd1Q99MH6 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.07□□□□□ -0.16
Nkd1Q99MH6 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkd1Q99MH6 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkd1Q99MH6 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkd1Q99MH6 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkd1Q99MH6 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkd1Q99MH6 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nkd1Q99MH6 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nkd1Q99MH6 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkd1Q99MH6 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nkd1Q99MH6 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkd1Q99MH6 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Nkd1Q99MH6 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nkd1Q99MH6 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.06□□□□□ -0.16
Nkd1Q99MH6 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nkd1Q99MH6 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkd1Q99MH6 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkd1Q99MH6 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkd1Q99MH6 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkd1Q99MH6 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkd1Q99MH6 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nkd1Q99MH6 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkd1Q99MH6 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkd1Q99MH6 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.06□□□□□ -0.16
Nkd1Q99MH6 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nkd1Q99MH6 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Nkd1Q99MH6 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkd1Q99MH6 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkd1Q99MH6 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkd1Q99MH6 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkd1Q99MH6 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.06□□□□□ -0.16
Nkd1Q99MH6 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkd1Q99MH6 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkd1Q99MH6 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.06□□□□□ -0.16
Nkd1Q99MH6 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.06□□□□□ -0.16
Nkd1Q99MH6 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC14.06□□□□□ -0.16
Nkd1Q99MH6 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkd1Q99MH6 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Nkd1Q99MH6 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Nkd1Q99MH6 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.06□□□□□ -0.16
Nkd1Q99MH6 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkd1Q99MH6 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Nkd1Q99MH6 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Nkd1Q99MH6 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms