Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx6-1Q99MA9 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx6-1Q99MA9 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx6-1Q99MA9 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx6-1Q99MA9 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx6-1Q99MA9 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx6-1Q99MA9 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.17
Nkx6-1Q99MA9 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx6-1Q99MA9 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx6-1Q99MA9 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx6-1Q99MA9 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Nkx6-1Q99MA9 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Nkx6-1Q99MA9 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Nkx6-1Q99MA9 Gm12091-201ENSMUST00000146791 830 ntBASIC13.96□□□□□ -0.17
Nkx6-1Q99MA9 Gm9719-201ENSMUST00000162765 543 ntBASIC13.96□□□□□ -0.17
Nkx6-1Q99MA9 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.96□□□□□ -0.17
Nkx6-1Q99MA9 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.96□□□□□ -0.17
Nkx6-1Q99MA9 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx6-1Q99MA9 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.96□□□□□ -0.17
Nkx6-1Q99MA9 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx6-1Q99MA9 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.96□□□□□ -0.17
Nkx6-1Q99MA9 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
Nkx6-1Q99MA9 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx6-1Q99MA9 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx6-1Q99MA9 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Nkx6-1Q99MA9 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC13.96□□□□□ -0.18
Nkx6-1Q99MA9 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.95□□□□□ -0.18
Nkx6-1Q99MA9 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx6-1Q99MA9 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx6-1Q99MA9 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx6-1Q99MA9 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx6-1Q99MA9 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx6-1Q99MA9 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Nkx6-1Q99MA9 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Nkx6-1Q99MA9 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Nkx6-1Q99MA9 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Nkx6-1Q99MA9 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx6-1Q99MA9 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.95□□□□□ -0.18
Nkx6-1Q99MA9 Gm9908-201ENSMUST00000211534 448 ntBASIC13.95□□□□□ -0.18
Nkx6-1Q99MA9 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC13.95□□□□□ -0.18
Nkx6-1Q99MA9 AC069562.2-201ENSMUST00000224644 2146 ntBASIC13.95□□□□□ -0.18
Nkx6-1Q99MA9 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx6-1Q99MA9 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx6-1Q99MA9 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx6-1Q99MA9 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx6-1Q99MA9 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx6-1Q99MA9 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC13.95□□□□□ -0.18
Nkx6-1Q99MA9 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx6-1Q99MA9 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx6-1Q99MA9 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx6-1Q99MA9 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx6-1Q99MA9 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx6-1Q99MA9 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx6-1Q99MA9 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx6-1Q99MA9 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx6-1Q99MA9 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx6-1Q99MA9 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Nkx6-1Q99MA9 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Nkx6-1Q99MA9 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx6-1Q99MA9 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx6-1Q99MA9 Gm5566-201ENSMUST00000116118 459 ntBASIC13.94□□□□□ -0.18
Nkx6-1Q99MA9 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.94□□□□□ -0.18
Nkx6-1Q99MA9 Mir1897-201ENSMUST00000122581 272 ntBASIC13.94□□□□□ -0.18
Nkx6-1Q99MA9 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.94□□□□□ -0.18
Nkx6-1Q99MA9 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13.94□□□□□ -0.18
Nkx6-1Q99MA9 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.94□□□□□ -0.18
Nkx6-1Q99MA9 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx6-1Q99MA9 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC13.94□□□□□ -0.18
Nkx6-1Q99MA9 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Nkx6-1Q99MA9 Gm8602-201ENSMUST00000184045 607 ntBASIC13.94□□□□□ -0.18
Nkx6-1Q99MA9 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.94□□□□□ -0.18
Nkx6-1Q99MA9 Gm18018-201ENSMUST00000198273 408 ntBASIC13.94□□□□□ -0.18
Nkx6-1Q99MA9 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx6-1Q99MA9 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx6-1Q99MA9 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx6-1Q99MA9 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx6-1Q99MA9 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Nkx6-1Q99MA9 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Nkx6-1Q99MA9 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Nkx6-1Q99MA9 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Nkx6-1Q99MA9 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Nkx6-1Q99MA9 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx6-1Q99MA9 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx6-1Q99MA9 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx6-1Q99MA9 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx6-1Q99MA9 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx6-1Q99MA9 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx6-1Q99MA9 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Nkx6-1Q99MA9 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx6-1Q99MA9 Gm13216-201ENSMUST00000117145 591 ntBASIC13.93□□□□□ -0.18
Nkx6-1Q99MA9 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.93□□□□□ -0.18
Nkx6-1Q99MA9 Gm7556-201ENSMUST00000201178 1084 ntBASIC13.93□□□□□ -0.18
Nkx6-1Q99MA9 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx6-1Q99MA9 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx6-1Q99MA9 Gm20445-201ENSMUST00000061905 565 ntBASIC13.93□□□□□ -0.18
Nkx6-1Q99MA9 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Nkx6-1Q99MA9 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx6-1Q99MA9 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx6-1Q99MA9 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx6-1Q99MA9 Gm26596-201ENSMUST00000180464 2655 ntBASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms