Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC17.13■□□□□ 0.33
Rfc4Q99J62 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rfc4Q99J62 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rfc4Q99J62 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rfc4Q99J62 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rfc4Q99J62 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.13■□□□□ 0.33
Rfc4Q99J62 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rfc4Q99J62 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rfc4Q99J62 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rfc4Q99J62 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rfc4Q99J62 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rfc4Q99J62 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rfc4Q99J62 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rfc4Q99J62 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rfc4Q99J62 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rfc4Q99J62 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC17.12■□□□□ 0.33
Rfc4Q99J62 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rfc4Q99J62 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rfc4Q99J62 Gm14127-201ENSMUST00000117906 678 ntBASIC17.12■□□□□ 0.33
Rfc4Q99J62 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC17.12■□□□□ 0.33
Rfc4Q99J62 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC17.12■□□□□ 0.33
Rfc4Q99J62 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Rfc4Q99J62 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC17.12■□□□□ 0.33
Rfc4Q99J62 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rfc4Q99J62 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Rfc4Q99J62 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rfc4Q99J62 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rfc4Q99J62 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Rfc4Q99J62 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rfc4Q99J62 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rfc4Q99J62 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC17.12■□□□□ 0.33
Rfc4Q99J62 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rfc4Q99J62 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Rfc4Q99J62 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rfc4Q99J62 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
Rfc4Q99J62 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rfc4Q99J62 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfc4Q99J62 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC17.11■□□□□ 0.33
Rfc4Q99J62 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfc4Q99J62 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfc4Q99J62 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfc4Q99J62 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rfc4Q99J62 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfc4Q99J62 Gm24543-201ENSMUST00000103867 82 ntBASIC17.11■□□□□ 0.33
Rfc4Q99J62 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfc4Q99J62 Gm9794-201ENSMUST00000202370 423 ntBASIC17.11■□□□□ 0.33
Rfc4Q99J62 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfc4Q99J62 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Rfc4Q99J62 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfc4Q99J62 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Rfc4Q99J62 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfc4Q99J62 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfc4Q99J62 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Rfc4Q99J62 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfc4Q99J62 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfc4Q99J62 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfc4Q99J62 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfc4Q99J62 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfc4Q99J62 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfc4Q99J62 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfc4Q99J62 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfc4Q99J62 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Rfc4Q99J62 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfc4Q99J62 Ptprs-211ENSMUST00000223859 5588 ntBASIC17.1■□□□□ 0.33
Rfc4Q99J62 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfc4Q99J62 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfc4Q99J62 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rfc4Q99J62 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfc4Q99J62 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Rfc4Q99J62 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC17.1■□□□□ 0.33
Rfc4Q99J62 Gm9719-201ENSMUST00000162765 543 ntBASIC17.1■□□□□ 0.33
Rfc4Q99J62 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Rfc4Q99J62 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC17.1■□□□□ 0.33
Rfc4Q99J62 AC090659.2-201ENSMUST00000225378 1186 ntBASIC17.1■□□□□ 0.33
Rfc4Q99J62 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfc4Q99J62 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfc4Q99J62 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC17.1■□□□□ 0.33
Rfc4Q99J62 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Rfc4Q99J62 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfc4Q99J62 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfc4Q99J62 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfc4Q99J62 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Rfc4Q99J62 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfc4Q99J62 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfc4Q99J62 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rfc4Q99J62 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfc4Q99J62 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Rfc4Q99J62 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Rfc4Q99J62 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfc4Q99J62 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC17.09■□□□□ 0.33
Rfc4Q99J62 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Rfc4Q99J62 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Rfc4Q99J62 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Rfc4Q99J62 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfc4Q99J62 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfc4Q99J62 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Rfc4Q99J62 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfc4Q99J62 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Rfc4Q99J62 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.09■□□□□ 0.33
Rfc4Q99J62 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms