Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Thumpd1Q99J36 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Thumpd1Q99J36 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Thumpd1Q99J36 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Thumpd1Q99J36 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Thumpd1Q99J36 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Thumpd1Q99J36 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Thumpd1Q99J36 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Thumpd1Q99J36 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Thumpd1Q99J36 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Thumpd1Q99J36 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Thumpd1Q99J36 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Thumpd1Q99J36 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Thumpd1Q99J36 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.31□□□□□ -0.28
Thumpd1Q99J36 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Thumpd1Q99J36 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC13.31□□□□□ -0.28
Thumpd1Q99J36 AC122024.2-201ENSMUST00000220086 871 ntBASIC13.31□□□□□ -0.28
Thumpd1Q99J36 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Thumpd1Q99J36 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.31□□□□□ -0.28
Thumpd1Q99J36 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Thumpd1Q99J36 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.31□□□□□ -0.28
Thumpd1Q99J36 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Thumpd1Q99J36 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Thumpd1Q99J36 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Thumpd1Q99J36 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Thumpd1Q99J36 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Thumpd1Q99J36 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Thumpd1Q99J36 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Thumpd1Q99J36 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Thumpd1Q99J36 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Thumpd1Q99J36 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Thumpd1Q99J36 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Thumpd1Q99J36 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Thumpd1Q99J36 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Thumpd1Q99J36 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Thumpd1Q99J36 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Thumpd1Q99J36 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Thumpd1Q99J36 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC13.3□□□□□ -0.28
Thumpd1Q99J36 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Thumpd1Q99J36 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC13.3□□□□□ -0.28
Thumpd1Q99J36 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Thumpd1Q99J36 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Thumpd1Q99J36 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Thumpd1Q99J36 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Thumpd1Q99J36 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Thumpd1Q99J36 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Thumpd1Q99J36 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Thumpd1Q99J36 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Thumpd1Q99J36 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Thumpd1Q99J36 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Thumpd1Q99J36 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Thumpd1Q99J36 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Thumpd1Q99J36 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Thumpd1Q99J36 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Thumpd1Q99J36 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Thumpd1Q99J36 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.3□□□□□ -0.28
Thumpd1Q99J36 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Thumpd1Q99J36 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Thumpd1Q99J36 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.3□□□□□ -0.28
Thumpd1Q99J36 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Thumpd1Q99J36 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Thumpd1Q99J36 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Thumpd1Q99J36 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.29□□□□□ -0.28
Thumpd1Q99J36 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thumpd1Q99J36 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Thumpd1Q99J36 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.29□□□□□ -0.28
Thumpd1Q99J36 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thumpd1Q99J36 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Thumpd1Q99J36 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thumpd1Q99J36 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Thumpd1Q99J36 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thumpd1Q99J36 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thumpd1Q99J36 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Thumpd1Q99J36 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Thumpd1Q99J36 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thumpd1Q99J36 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Thumpd1Q99J36 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Thumpd1Q99J36 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Thumpd1Q99J36 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Thumpd1Q99J36 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thumpd1Q99J36 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Thumpd1Q99J36 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thumpd1Q99J36 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thumpd1Q99J36 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.29□□□□□ -0.28
Thumpd1Q99J36 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thumpd1Q99J36 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thumpd1Q99J36 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thumpd1Q99J36 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thumpd1Q99J36 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thumpd1Q99J36 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Thumpd1Q99J36 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thumpd1Q99J36 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.29□□□□□ -0.28
Thumpd1Q99J36 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Thumpd1Q99J36 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thumpd1Q99J36 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Thumpd1Q99J36 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thumpd1Q99J36 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thumpd1Q99J36 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thumpd1Q99J36 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thumpd1Q99J36 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms