Protein–RNA interactions for Protein: Q91YY4

Atpaf2, ATP synthase mitochondrial F1 complex assembly factor 2, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atpaf2Q91YY4 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atpaf2Q91YY4 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Atpaf2Q91YY4 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Atpaf2Q91YY4 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atpaf2Q91YY4 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atpaf2Q91YY4 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atpaf2Q91YY4 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atpaf2Q91YY4 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Atpaf2Q91YY4 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.29■□□□□ 0.04
Atpaf2Q91YY4 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Atpaf2Q91YY4 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atpaf2Q91YY4 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Atpaf2Q91YY4 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.29■□□□□ 0.04
Atpaf2Q91YY4 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Atpaf2Q91YY4 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Atpaf2Q91YY4 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atpaf2Q91YY4 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atpaf2Q91YY4 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atpaf2Q91YY4 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atpaf2Q91YY4 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atpaf2Q91YY4 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Atpaf2Q91YY4 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC15.29■□□□□ 0.04
Atpaf2Q91YY4 Gm8000-201ENSMUST00000188378 592 ntBASIC15.29■□□□□ 0.04
Atpaf2Q91YY4 Gm44945-201ENSMUST00000206764 1187 ntBASIC15.29■□□□□ 0.04
Atpaf2Q91YY4 Gm45683-201ENSMUST00000210825 1247 ntBASIC15.29■□□□□ 0.04
Atpaf2Q91YY4 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atpaf2Q91YY4 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atpaf2Q91YY4 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atpaf2Q91YY4 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Atpaf2Q91YY4 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.29■□□□□ 0.04
Atpaf2Q91YY4 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atpaf2Q91YY4 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atpaf2Q91YY4 Gm38058-201ENSMUST00000194323 4368 ntBASIC15.29■□□□□ 0.04
Atpaf2Q91YY4 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atpaf2Q91YY4 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atpaf2Q91YY4 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atpaf2Q91YY4 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atpaf2Q91YY4 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.28■□□□□ 0.04
Atpaf2Q91YY4 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC15.28■□□□□ 0.04
Atpaf2Q91YY4 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.28■□□□□ 0.04
Atpaf2Q91YY4 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atpaf2Q91YY4 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atpaf2Q91YY4 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Atpaf2Q91YY4 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atpaf2Q91YY4 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atpaf2Q91YY4 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atpaf2Q91YY4 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Atpaf2Q91YY4 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC15.28■□□□□ 0.04
Atpaf2Q91YY4 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atpaf2Q91YY4 Mir3113-201ENSMUST00000175478 76 ntBASIC15.28■□□□□ 0.04
Atpaf2Q91YY4 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atpaf2Q91YY4 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.28■□□□□ 0.04
Atpaf2Q91YY4 AC154572.2-201ENSMUST00000225105 997 ntBASIC15.28■□□□□ 0.04
Atpaf2Q91YY4 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.28■□□□□ 0.04
Atpaf2Q91YY4 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atpaf2Q91YY4 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atpaf2Q91YY4 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atpaf2Q91YY4 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Atpaf2Q91YY4 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Atpaf2Q91YY4 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atpaf2Q91YY4 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Atpaf2Q91YY4 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atpaf2Q91YY4 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Atpaf2Q91YY4 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Atpaf2Q91YY4 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Atpaf2Q91YY4 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Atpaf2Q91YY4 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Atpaf2Q91YY4 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Atpaf2Q91YY4 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.27■□□□□ 0.04
Atpaf2Q91YY4 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Atpaf2Q91YY4 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Atpaf2Q91YY4 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Atpaf2Q91YY4 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Atpaf2Q91YY4 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Atpaf2Q91YY4 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
Atpaf2Q91YY4 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC15.27■□□□□ 0.04
Atpaf2Q91YY4 Gm16198-201ENSMUST00000118766 670 ntBASIC15.27■□□□□ 0.04
Atpaf2Q91YY4 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC15.27■□□□□ 0.04
Atpaf2Q91YY4 Gm15593-201ENSMUST00000122085 1008 ntBASIC15.27■□□□□ 0.04
Atpaf2Q91YY4 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Atpaf2Q91YY4 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Atpaf2Q91YY4 Mir8117-201ENSMUST00000184773 107 ntBASIC15.27■□□□□ 0.04
Atpaf2Q91YY4 Gm17968-201ENSMUST00000194902 784 ntBASIC15.27■□□□□ 0.04
Atpaf2Q91YY4 Gm2272-201ENSMUST00000194903 582 ntBASIC15.27■□□□□ 0.04
Atpaf2Q91YY4 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC15.27■□□□□ 0.04
Atpaf2Q91YY4 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Atpaf2Q91YY4 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC15.27■□□□□ 0.04
Atpaf2Q91YY4 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Atpaf2Q91YY4 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Atpaf2Q91YY4 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC15.27■□□□□ 0.04
Atpaf2Q91YY4 Gm10154-201ENSMUST00000084445 354 ntBASIC15.27■□□□□ 0.04
Atpaf2Q91YY4 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Atpaf2Q91YY4 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Atpaf2Q91YY4 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Atpaf2Q91YY4 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Atpaf2Q91YY4 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
Atpaf2Q91YY4 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Atpaf2Q91YY4 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.26■□□□□ 0.03
Atpaf2Q91YY4 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Atpaf2Q91YY4 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms