Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdha11Q91Y19 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdha11Q91Y19 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdha11Q91Y19 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.67■□□□□ 0.1
Pcdha11Q91Y19 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdha11Q91Y19 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdha11Q91Y19 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdha11Q91Y19 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdha11Q91Y19 Gm13332-201ENSMUST00000120451 1398 ntBASIC15.67■□□□□ 0.1
Pcdha11Q91Y19 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
Pcdha11Q91Y19 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Pcdha11Q91Y19 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Pcdha11Q91Y19 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdha11Q91Y19 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC15.67■□□□□ 0.1
Pcdha11Q91Y19 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Pcdha11Q91Y19 Mxra8os-201ENSMUST00000097740 687 ntBASIC15.67■□□□□ 0.1
Pcdha11Q91Y19 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdha11Q91Y19 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC15.67■□□□□ 0.1
Pcdha11Q91Y19 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdha11Q91Y19 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC15.67■□□□□ 0.1
Pcdha11Q91Y19 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdha11Q91Y19 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdha11Q91Y19 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdha11Q91Y19 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdha11Q91Y19 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdha11Q91Y19 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.67■□□□□ 0.1
Pcdha11Q91Y19 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Pcdha11Q91Y19 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdha11Q91Y19 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdha11Q91Y19 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Pcdha11Q91Y19 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdha11Q91Y19 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdha11Q91Y19 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdha11Q91Y19 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdha11Q91Y19 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Pcdha11Q91Y19 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdha11Q91Y19 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdha11Q91Y19 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdha11Q91Y19 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdha11Q91Y19 Gm43195-201ENSMUST00000200614 2332 ntBASIC15.66■□□□□ 0.1
Pcdha11Q91Y19 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdha11Q91Y19 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdha11Q91Y19 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdha11Q91Y19 Gm13365-201ENSMUST00000121188 973 ntBASIC15.66■□□□□ 0.1
Pcdha11Q91Y19 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdha11Q91Y19 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdha11Q91Y19 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC15.66■□□□□ 0.1
Pcdha11Q91Y19 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC15.66■□□□□ 0.1
Pcdha11Q91Y19 Gm5628-201ENSMUST00000222318 1049 ntBASIC15.66■□□□□ 0.1
Pcdha11Q91Y19 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdha11Q91Y19 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdha11Q91Y19 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdha11Q91Y19 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.66■□□□□ 0.1
Pcdha11Q91Y19 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Pcdha11Q91Y19 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Pcdha11Q91Y19 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Pcdha11Q91Y19 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdha11Q91Y19 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdha11Q91Y19 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
Pcdha11Q91Y19 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdha11Q91Y19 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdha11Q91Y19 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
Pcdha11Q91Y19 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Pcdha11Q91Y19 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.66■□□□□ 0.1
Pcdha11Q91Y19 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdha11Q91Y19 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdha11Q91Y19 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Pcdha11Q91Y19 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdha11Q91Y19 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC15.65■□□□□ 0.1
Pcdha11Q91Y19 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC15.65■□□□□ 0.1
Pcdha11Q91Y19 CT030684.1-201ENSMUST00000227292 914 ntBASIC15.65■□□□□ 0.1
Pcdha11Q91Y19 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdha11Q91Y19 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdha11Q91Y19 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdha11Q91Y19 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdha11Q91Y19 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdha11Q91Y19 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdha11Q91Y19 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
Pcdha11Q91Y19 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdha11Q91Y19 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdha11Q91Y19 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Pcdha11Q91Y19 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Pcdha11Q91Y19 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdha11Q91Y19 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdha11Q91Y19 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdha11Q91Y19 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdha11Q91Y19 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdha11Q91Y19 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdha11Q91Y19 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdha11Q91Y19 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdha11Q91Y19 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Pcdha11Q91Y19 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdha11Q91Y19 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdha11Q91Y19 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdha11Q91Y19 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.64■□□□□ 0.09
Pcdha11Q91Y19 Gm12017-201ENSMUST00000122453 1003 ntBASIC15.64■□□□□ 0.09
Pcdha11Q91Y19 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15.64■□□□□ 0.09
Pcdha11Q91Y19 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdha11Q91Y19 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdha11Q91Y19 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms