Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhga3Q91XY5 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.32□□□□□ -0.28
Pcdhga3Q91XY5 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhga3Q91XY5 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC13.32□□□□□ -0.28
Pcdhga3Q91XY5 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Pcdhga3Q91XY5 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhga3Q91XY5 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhga3Q91XY5 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhga3Q91XY5 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhga3Q91XY5 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhga3Q91XY5 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhga3Q91XY5 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhga3Q91XY5 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhga3Q91XY5 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga3Q91XY5 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga3Q91XY5 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.31□□□□□ -0.28
Pcdhga3Q91XY5 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga3Q91XY5 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga3Q91XY5 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga3Q91XY5 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga3Q91XY5 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Pcdhga3Q91XY5 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Pcdhga3Q91XY5 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga3Q91XY5 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga3Q91XY5 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga3Q91XY5 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Pcdhga3Q91XY5 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga3Q91XY5 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga3Q91XY5 Gm11185-201ENSMUST00000117732 1007 ntBASIC13.31□□□□□ -0.28
Pcdhga3Q91XY5 Gm13884-201ENSMUST00000118103 829 ntBASIC13.31□□□□□ -0.28
Pcdhga3Q91XY5 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.31□□□□□ -0.28
Pcdhga3Q91XY5 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga3Q91XY5 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Pcdhga3Q91XY5 Gm18489-201ENSMUST00000172565 551 ntBASIC13.31□□□□□ -0.28
Pcdhga3Q91XY5 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Pcdhga3Q91XY5 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga3Q91XY5 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga3Q91XY5 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga3Q91XY5 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga3Q91XY5 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga3Q91XY5 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga3Q91XY5 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga3Q91XY5 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Pcdhga3Q91XY5 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.31□□□□□ -0.28
Pcdhga3Q91XY5 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga3Q91XY5 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhga3Q91XY5 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhga3Q91XY5 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhga3Q91XY5 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC13.3□□□□□ -0.28
Pcdhga3Q91XY5 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhga3Q91XY5 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC13.3□□□□□ -0.28
Pcdhga3Q91XY5 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
Pcdhga3Q91XY5 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhga3Q91XY5 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhga3Q91XY5 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhga3Q91XY5 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhga3Q91XY5 Gm15173-201ENSMUST00000122049 433 ntBASIC13.3□□□□□ -0.28
Pcdhga3Q91XY5 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhga3Q91XY5 Gm6550-201ENSMUST00000187574 993 ntBASIC13.3□□□□□ -0.28
Pcdhga3Q91XY5 Gm37153-201ENSMUST00000193637 231 ntBASIC13.3□□□□□ -0.28
Pcdhga3Q91XY5 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC13.3□□□□□ -0.28
Pcdhga3Q91XY5 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhga3Q91XY5 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhga3Q91XY5 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Pcdhga3Q91XY5 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhga3Q91XY5 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhga3Q91XY5 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhga3Q91XY5 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhga3Q91XY5 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhga3Q91XY5 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.3□□□□□ -0.28
Pcdhga3Q91XY5 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhga3Q91XY5 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhga3Q91XY5 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhga3Q91XY5 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhga3Q91XY5 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhga3Q91XY5 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.29□□□□□ -0.28
Pcdhga3Q91XY5 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhga3Q91XY5 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Pcdhga3Q91XY5 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhga3Q91XY5 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhga3Q91XY5 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhga3Q91XY5 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhga3Q91XY5 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhga3Q91XY5 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Pcdhga3Q91XY5 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhga3Q91XY5 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Pcdhga3Q91XY5 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhga3Q91XY5 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Pcdhga3Q91XY5 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Pcdhga3Q91XY5 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhga3Q91XY5 Gm11764-201ENSMUST00000120221 623 ntBASIC13.29□□□□□ -0.28
Pcdhga3Q91XY5 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhga3Q91XY5 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhga3Q91XY5 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhga3Q91XY5 Gm18195-201ENSMUST00000207604 706 ntBASIC13.29□□□□□ -0.28
Pcdhga3Q91XY5 Gm10060-201ENSMUST00000212002 111 ntBASIC13.29□□□□□ -0.28
Pcdhga3Q91XY5 AC164629.2-201ENSMUST00000217916 270 ntBASIC13.29□□□□□ -0.28
Pcdhga3Q91XY5 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Pcdhga3Q91XY5 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhga3Q91XY5 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms