Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
StrcQ8VIM6 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
StrcQ8VIM6 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
StrcQ8VIM6 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
StrcQ8VIM6 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
StrcQ8VIM6 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC17.44■□□□□ 0.38
StrcQ8VIM6 Gm6983-201ENSMUST00000214912 628 ntBASIC17.44■□□□□ 0.38
StrcQ8VIM6 AC126253.1-201ENSMUST00000227974 824 ntBASIC17.44■□□□□ 0.38
StrcQ8VIM6 Gm9823-201ENSMUST00000051212 327 ntBASIC17.44■□□□□ 0.38
StrcQ8VIM6 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
StrcQ8VIM6 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
StrcQ8VIM6 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
StrcQ8VIM6 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
StrcQ8VIM6 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
StrcQ8VIM6 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
StrcQ8VIM6 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
StrcQ8VIM6 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
StrcQ8VIM6 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
StrcQ8VIM6 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
StrcQ8VIM6 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
StrcQ8VIM6 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC17.43■□□□□ 0.38
StrcQ8VIM6 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
StrcQ8VIM6 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC17.43■□□□□ 0.38
StrcQ8VIM6 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC17.43■□□□□ 0.38
StrcQ8VIM6 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
StrcQ8VIM6 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
StrcQ8VIM6 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
StrcQ8VIM6 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
StrcQ8VIM6 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
StrcQ8VIM6 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
StrcQ8VIM6 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
StrcQ8VIM6 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
StrcQ8VIM6 Gm13050-201ENSMUST00000122149 1345 ntBASIC17.43■□□□□ 0.38
StrcQ8VIM6 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
StrcQ8VIM6 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
StrcQ8VIM6 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC17.42■□□□□ 0.38
StrcQ8VIM6 Gm22018-201ENSMUST00000104357 131 ntBASIC17.42■□□□□ 0.38
StrcQ8VIM6 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC17.42■□□□□ 0.38
StrcQ8VIM6 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC17.42■□□□□ 0.38
StrcQ8VIM6 Gm4959-201ENSMUST00000197271 1044 ntBASIC17.42■□□□□ 0.38
StrcQ8VIM6 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC17.42■□□□□ 0.38
StrcQ8VIM6 AC139350.3-201ENSMUST00000226151 420 ntBASIC17.42■□□□□ 0.38
StrcQ8VIM6 Gm10012-201ENSMUST00000078252 192 ntBASIC17.42■□□□□ 0.38
StrcQ8VIM6 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
StrcQ8VIM6 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
StrcQ8VIM6 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
StrcQ8VIM6 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
StrcQ8VIM6 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
StrcQ8VIM6 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
StrcQ8VIM6 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC17.42■□□□□ 0.38
StrcQ8VIM6 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
StrcQ8VIM6 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
StrcQ8VIM6 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC17.42■□□□□ 0.38
StrcQ8VIM6 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC17.42■□□□□ 0.38
StrcQ8VIM6 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC17.42■□□□□ 0.38
StrcQ8VIM6 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
StrcQ8VIM6 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC17.42■□□□□ 0.38
StrcQ8VIM6 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
StrcQ8VIM6 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
StrcQ8VIM6 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
StrcQ8VIM6 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
StrcQ8VIM6 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
StrcQ8VIM6 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
StrcQ8VIM6 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
StrcQ8VIM6 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
StrcQ8VIM6 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
StrcQ8VIM6 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC17.41■□□□□ 0.38
StrcQ8VIM6 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC17.41■□□□□ 0.38
StrcQ8VIM6 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC17.41■□□□□ 0.38
StrcQ8VIM6 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
StrcQ8VIM6 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
StrcQ8VIM6 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC17.41■□□□□ 0.38
StrcQ8VIM6 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
StrcQ8VIM6 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
StrcQ8VIM6 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
StrcQ8VIM6 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
StrcQ8VIM6 Gm7553-201ENSMUST00000185805 1426 ntBASIC17.41■□□□□ 0.38
StrcQ8VIM6 Gm18222-201ENSMUST00000202416 1387 ntBASIC17.41■□□□□ 0.38
StrcQ8VIM6 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
StrcQ8VIM6 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
StrcQ8VIM6 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
StrcQ8VIM6 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
StrcQ8VIM6 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
StrcQ8VIM6 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
StrcQ8VIM6 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.4■□□□□ 0.38
StrcQ8VIM6 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC17.4■□□□□ 0.38
StrcQ8VIM6 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
StrcQ8VIM6 Gm12329-201ENSMUST00000120829 1007 ntBASIC17.4■□□□□ 0.38
StrcQ8VIM6 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC17.4■□□□□ 0.38
StrcQ8VIM6 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC17.4■□□□□ 0.38
StrcQ8VIM6 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC17.4■□□□□ 0.38
StrcQ8VIM6 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
StrcQ8VIM6 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC17.4■□□□□ 0.38
StrcQ8VIM6 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
StrcQ8VIM6 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
StrcQ8VIM6 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
StrcQ8VIM6 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC17.4■□□□□ 0.38
StrcQ8VIM6 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
StrcQ8VIM6 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC17.4■□□□□ 0.38
StrcQ8VIM6 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms