Protein–RNA interactions for Protein: Q8VI88

Odf4, Outer dense fiber protein 4, mousemouse

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf4Q8VI88 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Odf4Q8VI88 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC13.4□□□□□ -0.26
Odf4Q8VI88 Gm11780-201ENSMUST00000136880 516 ntBASIC13.4□□□□□ -0.26
Odf4Q8VI88 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC13.4□□□□□ -0.26
Odf4Q8VI88 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Odf4Q8VI88 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Odf4Q8VI88 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC13.4□□□□□ -0.26
Odf4Q8VI88 Gm43073-201ENSMUST00000198200 1189 ntBASIC13.4□□□□□ -0.26
Odf4Q8VI88 Gm43332-201ENSMUST00000202511 1044 ntBASIC13.4□□□□□ -0.26
Odf4Q8VI88 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC13.4□□□□□ -0.26
Odf4Q8VI88 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Odf4Q8VI88 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Odf4Q8VI88 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Odf4Q8VI88 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Odf4Q8VI88 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Odf4Q8VI88 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Odf4Q8VI88 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Odf4Q8VI88 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Odf4Q8VI88 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Odf4Q8VI88 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Odf4Q8VI88 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Odf4Q8VI88 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Odf4Q8VI88 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Odf4Q8VI88 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13.4□□□□□ -0.26
Odf4Q8VI88 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.4□□□□□ -0.26
Odf4Q8VI88 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Odf4Q8VI88 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Odf4Q8VI88 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Odf4Q8VI88 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Odf4Q8VI88 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Odf4Q8VI88 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.39□□□□□ -0.27
Odf4Q8VI88 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Odf4Q8VI88 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.39□□□□□ -0.27
Odf4Q8VI88 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Odf4Q8VI88 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Odf4Q8VI88 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Odf4Q8VI88 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Odf4Q8VI88 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Odf4Q8VI88 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Odf4Q8VI88 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Odf4Q8VI88 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC13.39□□□□□ -0.27
Odf4Q8VI88 Gm5264-201ENSMUST00000190584 848 ntBASIC13.39□□□□□ -0.27
Odf4Q8VI88 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC13.39□□□□□ -0.27
Odf4Q8VI88 Psmb5-202ENSMUST00000227257 622 ntBASIC13.39□□□□□ -0.27
Odf4Q8VI88 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Odf4Q8VI88 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Odf4Q8VI88 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Odf4Q8VI88 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Odf4Q8VI88 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Odf4Q8VI88 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Odf4Q8VI88 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Odf4Q8VI88 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Odf4Q8VI88 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Odf4Q8VI88 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Odf4Q8VI88 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.39□□□□□ -0.27
Odf4Q8VI88 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Odf4Q8VI88 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Odf4Q8VI88 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Odf4Q8VI88 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC13.39□□□□□ -0.27
Odf4Q8VI88 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Odf4Q8VI88 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Odf4Q8VI88 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Odf4Q8VI88 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Odf4Q8VI88 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Odf4Q8VI88 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Odf4Q8VI88 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Odf4Q8VI88 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Odf4Q8VI88 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC13.38□□□□□ -0.27
Odf4Q8VI88 Gm7222-201ENSMUST00000117512 906 ntBASIC13.38□□□□□ -0.27
Odf4Q8VI88 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC13.38□□□□□ -0.27
Odf4Q8VI88 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC13.38□□□□□ -0.27
Odf4Q8VI88 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Odf4Q8VI88 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC13.38□□□□□ -0.27
Odf4Q8VI88 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC13.38□□□□□ -0.27
Odf4Q8VI88 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC13.38□□□□□ -0.27
Odf4Q8VI88 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Odf4Q8VI88 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC13.38□□□□□ -0.27
Odf4Q8VI88 AC154222.1-201ENSMUST00000223882 475 ntBASIC13.38□□□□□ -0.27
Odf4Q8VI88 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Odf4Q8VI88 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Odf4Q8VI88 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Odf4Q8VI88 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Odf4Q8VI88 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Odf4Q8VI88 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Odf4Q8VI88 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Odf4Q8VI88 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Odf4Q8VI88 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Odf4Q8VI88 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Odf4Q8VI88 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Odf4Q8VI88 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Odf4Q8VI88 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Odf4Q8VI88 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Odf4Q8VI88 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Odf4Q8VI88 Gm3928-201ENSMUST00000121141 1307 ntBASIC13.38□□□□□ -0.27
Odf4Q8VI88 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Odf4Q8VI88 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Odf4Q8VI88 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Odf4Q8VI88 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.37□□□□□ -0.27
Odf4Q8VI88 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.37□□□□□ -0.27
Odf4Q8VI88 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms