Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx39aQ8VDW0 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx39aQ8VDW0 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx39aQ8VDW0 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx39aQ8VDW0 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.54■□□□□ 0.24
Ddx39aQ8VDW0 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Ddx39aQ8VDW0 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx39aQ8VDW0 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx39aQ8VDW0 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Ddx39aQ8VDW0 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx39aQ8VDW0 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx39aQ8VDW0 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx39aQ8VDW0 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx39aQ8VDW0 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx39aQ8VDW0 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx39aQ8VDW0 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx39aQ8VDW0 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx39aQ8VDW0 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx39aQ8VDW0 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx39aQ8VDW0 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx39aQ8VDW0 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC16.54■□□□□ 0.24
Ddx39aQ8VDW0 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx39aQ8VDW0 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx39aQ8VDW0 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC16.54■□□□□ 0.24
Ddx39aQ8VDW0 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx39aQ8VDW0 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx39aQ8VDW0 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx39aQ8VDW0 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx39aQ8VDW0 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx39aQ8VDW0 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx39aQ8VDW0 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx39aQ8VDW0 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
Ddx39aQ8VDW0 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx39aQ8VDW0 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx39aQ8VDW0 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC16.53■□□□□ 0.24
Ddx39aQ8VDW0 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx39aQ8VDW0 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx39aQ8VDW0 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx39aQ8VDW0 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx39aQ8VDW0 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx39aQ8VDW0 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx39aQ8VDW0 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx39aQ8VDW0 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx39aQ8VDW0 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx39aQ8VDW0 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx39aQ8VDW0 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx39aQ8VDW0 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx39aQ8VDW0 Gm5049-201ENSMUST00000195878 1590 ntBASIC16.53■□□□□ 0.24
Ddx39aQ8VDW0 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC16.53■□□□□ 0.24
Ddx39aQ8VDW0 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx39aQ8VDW0 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx39aQ8VDW0 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC16.53■□□□□ 0.24
Ddx39aQ8VDW0 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Ddx39aQ8VDW0 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC16.53■□□□□ 0.24
Ddx39aQ8VDW0 Gm9824-201ENSMUST00000178707 561 ntBASIC16.53■□□□□ 0.24
Ddx39aQ8VDW0 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx39aQ8VDW0 Gm27622-201ENSMUST00000183779 60 ntBASIC16.53■□□□□ 0.24
Ddx39aQ8VDW0 Gm37277-201ENSMUST00000194052 1111 ntBASIC16.53■□□□□ 0.24
Ddx39aQ8VDW0 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC16.53■□□□□ 0.24
Ddx39aQ8VDW0 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx39aQ8VDW0 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC16.53■□□□□ 0.24
Ddx39aQ8VDW0 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Ddx39aQ8VDW0 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx39aQ8VDW0 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx39aQ8VDW0 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx39aQ8VDW0 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx39aQ8VDW0 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC16.53■□□□□ 0.24
Ddx39aQ8VDW0 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Ddx39aQ8VDW0 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx39aQ8VDW0 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC16.53■□□□□ 0.24
Ddx39aQ8VDW0 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx39aQ8VDW0 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx39aQ8VDW0 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Ddx39aQ8VDW0 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx39aQ8VDW0 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx39aQ8VDW0 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC16.53■□□□□ 0.24
Ddx39aQ8VDW0 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx39aQ8VDW0 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx39aQ8VDW0 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Ddx39aQ8VDW0 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx39aQ8VDW0 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx39aQ8VDW0 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx39aQ8VDW0 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx39aQ8VDW0 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx39aQ8VDW0 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx39aQ8VDW0 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx39aQ8VDW0 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx39aQ8VDW0 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx39aQ8VDW0 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.52■□□□□ 0.24
Ddx39aQ8VDW0 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC16.52■□□□□ 0.24
Ddx39aQ8VDW0 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx39aQ8VDW0 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Ddx39aQ8VDW0 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx39aQ8VDW0 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
Ddx39aQ8VDW0 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Ddx39aQ8VDW0 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Ddx39aQ8VDW0 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Ddx39aQ8VDW0 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx39aQ8VDW0 Gm6415-201ENSMUST00000118488 348 ntBASIC16.52■□□□□ 0.24
Ddx39aQ8VDW0 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms