Protein–RNA interactions for Protein: Q8VD57

Sft2d2, Vesicle transport protein SFT2B, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sft2d2Q8VD57 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sft2d2Q8VD57 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sft2d2Q8VD57 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sft2d2Q8VD57 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Sft2d2Q8VD57 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sft2d2Q8VD57 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sft2d2Q8VD57 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.04□□□□□ -0.48
Sft2d2Q8VD57 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sft2d2Q8VD57 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sft2d2Q8VD57 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sft2d2Q8VD57 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sft2d2Q8VD57 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sft2d2Q8VD57 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC12.04□□□□□ -0.48
Sft2d2Q8VD57 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC12.04□□□□□ -0.48
Sft2d2Q8VD57 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sft2d2Q8VD57 Gm29994-201ENSMUST00000195495 1193 ntBASIC12.04□□□□□ -0.48
Sft2d2Q8VD57 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sft2d2Q8VD57 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sft2d2Q8VD57 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Sft2d2Q8VD57 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sft2d2Q8VD57 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sft2d2Q8VD57 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sft2d2Q8VD57 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sft2d2Q8VD57 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Sft2d2Q8VD57 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sft2d2Q8VD57 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Sft2d2Q8VD57 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sft2d2Q8VD57 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sft2d2Q8VD57 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sft2d2Q8VD57 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sft2d2Q8VD57 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sft2d2Q8VD57 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sft2d2Q8VD57 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Sft2d2Q8VD57 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.04□□□□□ -0.48
Sft2d2Q8VD57 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sft2d2Q8VD57 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sft2d2Q8VD57 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.03□□□□□ -0.48
Sft2d2Q8VD57 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC12.03□□□□□ -0.48
Sft2d2Q8VD57 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sft2d2Q8VD57 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sft2d2Q8VD57 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sft2d2Q8VD57 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sft2d2Q8VD57 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sft2d2Q8VD57 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC12.03□□□□□ -0.48
Sft2d2Q8VD57 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sft2d2Q8VD57 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sft2d2Q8VD57 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sft2d2Q8VD57 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sft2d2Q8VD57 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sft2d2Q8VD57 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.03□□□□□ -0.48
Sft2d2Q8VD57 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sft2d2Q8VD57 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC12.03□□□□□ -0.48
Sft2d2Q8VD57 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC12.03□□□□□ -0.48
Sft2d2Q8VD57 Gm37856-201ENSMUST00000191634 999 ntBASIC12.03□□□□□ -0.48
Sft2d2Q8VD57 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC12.03□□□□□ -0.48
Sft2d2Q8VD57 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC12.03□□□□□ -0.48
Sft2d2Q8VD57 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sft2d2Q8VD57 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sft2d2Q8VD57 Gm10602-201ENSMUST00000098239 609 ntBASIC12.03□□□□□ -0.48
Sft2d2Q8VD57 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.03□□□□□ -0.48
Sft2d2Q8VD57 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sft2d2Q8VD57 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sft2d2Q8VD57 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sft2d2Q8VD57 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sft2d2Q8VD57 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sft2d2Q8VD57 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sft2d2Q8VD57 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sft2d2Q8VD57 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Sft2d2Q8VD57 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sft2d2Q8VD57 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sft2d2Q8VD57 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.03□□□□□ -0.48
Sft2d2Q8VD57 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC12.03□□□□□ -0.48
Sft2d2Q8VD57 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sft2d2Q8VD57 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sft2d2Q8VD57 Acot6-202ENSMUST00000222921 3622 ntBASIC12.03□□□□□ -0.48
Sft2d2Q8VD57 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sft2d2Q8VD57 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Sft2d2Q8VD57 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Sft2d2Q8VD57 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Sft2d2Q8VD57 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sft2d2Q8VD57 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC12.02□□□□□ -0.48
Sft2d2Q8VD57 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sft2d2Q8VD57 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sft2d2Q8VD57 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Sft2d2Q8VD57 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Sft2d2Q8VD57 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Sft2d2Q8VD57 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sft2d2Q8VD57 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sft2d2Q8VD57 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sft2d2Q8VD57 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sft2d2Q8VD57 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
Sft2d2Q8VD57 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
Sft2d2Q8VD57 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC12.02□□□□□ -0.49
Sft2d2Q8VD57 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sft2d2Q8VD57 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sft2d2Q8VD57 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sft2d2Q8VD57 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
Sft2d2Q8VD57 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sft2d2Q8VD57 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sft2d2Q8VD57 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms