Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nup35Q8R4R6 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nup35Q8R4R6 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nup35Q8R4R6 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Nup35Q8R4R6 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Nup35Q8R4R6 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nup35Q8R4R6 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nup35Q8R4R6 Gm12497-201ENSMUST00000138778 237 ntBASIC12.18□□□□□ -0.46
Nup35Q8R4R6 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nup35Q8R4R6 Gm25745-201ENSMUST00000174945 133 ntBASIC12.18□□□□□ -0.46
Nup35Q8R4R6 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC12.18□□□□□ -0.46
Nup35Q8R4R6 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC12.18□□□□□ -0.46
Nup35Q8R4R6 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nup35Q8R4R6 AC122024.2-201ENSMUST00000220086 871 ntBASIC12.18□□□□□ -0.46
Nup35Q8R4R6 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nup35Q8R4R6 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nup35Q8R4R6 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nup35Q8R4R6 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nup35Q8R4R6 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Nup35Q8R4R6 Gm10710-201ENSMUST00000047876 3971 ntBASIC12.18□□□□□ -0.46
Nup35Q8R4R6 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nup35Q8R4R6 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
Nup35Q8R4R6 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nup35Q8R4R6 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.18□□□□□ -0.46
Nup35Q8R4R6 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nup35Q8R4R6 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nup35Q8R4R6 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nup35Q8R4R6 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Nup35Q8R4R6 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nup35Q8R4R6 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nup35Q8R4R6 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nup35Q8R4R6 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Nup35Q8R4R6 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.18□□□□□ -0.46
Nup35Q8R4R6 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.18□□□□□ -0.46
Nup35Q8R4R6 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nup35Q8R4R6 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nup35Q8R4R6 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nup35Q8R4R6 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nup35Q8R4R6 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nup35Q8R4R6 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nup35Q8R4R6 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nup35Q8R4R6 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Nup35Q8R4R6 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Nup35Q8R4R6 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nup35Q8R4R6 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nup35Q8R4R6 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nup35Q8R4R6 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC12.17□□□□□ -0.46
Nup35Q8R4R6 Gm4459-201ENSMUST00000118750 468 ntBASIC12.17□□□□□ -0.46
Nup35Q8R4R6 Gm15358-201ENSMUST00000119249 520 ntBASIC12.17□□□□□ -0.46
Nup35Q8R4R6 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC12.17□□□□□ -0.46
Nup35Q8R4R6 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nup35Q8R4R6 Gm29518-201ENSMUST00000190858 372 ntBASIC12.17□□□□□ -0.46
Nup35Q8R4R6 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nup35Q8R4R6 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC12.17□□□□□ -0.46
Nup35Q8R4R6 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nup35Q8R4R6 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
Nup35Q8R4R6 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nup35Q8R4R6 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nup35Q8R4R6 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nup35Q8R4R6 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nup35Q8R4R6 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC12.17□□□□□ -0.46
Nup35Q8R4R6 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Nup35Q8R4R6 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.17□□□□□ -0.46
Nup35Q8R4R6 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nup35Q8R4R6 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nup35Q8R4R6 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nup35Q8R4R6 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Nup35Q8R4R6 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nup35Q8R4R6 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nup35Q8R4R6 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nup35Q8R4R6 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nup35Q8R4R6 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nup35Q8R4R6 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nup35Q8R4R6 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nup35Q8R4R6 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nup35Q8R4R6 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nup35Q8R4R6 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nup35Q8R4R6 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nup35Q8R4R6 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nup35Q8R4R6 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nup35Q8R4R6 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nup35Q8R4R6 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC12.16□□□□□ -0.46
Nup35Q8R4R6 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Nup35Q8R4R6 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Nup35Q8R4R6 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nup35Q8R4R6 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nup35Q8R4R6 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC12.16□□□□□ -0.46
Nup35Q8R4R6 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nup35Q8R4R6 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC12.16□□□□□ -0.46
Nup35Q8R4R6 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC12.16□□□□□ -0.46
Nup35Q8R4R6 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nup35Q8R4R6 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nup35Q8R4R6 AC093926.2-201ENSMUST00000214468 1228 ntBASIC12.16□□□□□ -0.46
Nup35Q8R4R6 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nup35Q8R4R6 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Nup35Q8R4R6 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nup35Q8R4R6 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nup35Q8R4R6 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nup35Q8R4R6 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nup35Q8R4R6 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms