Protein–RNA interactions for Protein: Q8K377

Lrrtm1, Leucine-rich repeat transmembrane neuronal protein 1, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm1Q8K377 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lrrtm1Q8K377 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Lrrtm1Q8K377 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lrrtm1Q8K377 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lrrtm1Q8K377 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Lrrtm1Q8K377 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lrrtm1Q8K377 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lrrtm1Q8K377 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lrrtm1Q8K377 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lrrtm1Q8K377 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lrrtm1Q8K377 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lrrtm1Q8K377 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Lrrtm1Q8K377 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Lrrtm1Q8K377 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lrrtm1Q8K377 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC12.82□□□□□ -0.36
Lrrtm1Q8K377 AC127349.1-201ENSMUST00000224590 266 ntBASIC12.82□□□□□ -0.36
Lrrtm1Q8K377 AC159093.1-201ENSMUST00000227779 380 ntBASIC12.82□□□□□ -0.36
Lrrtm1Q8K377 AC117588.1-201ENSMUST00000228510 999 ntBASIC12.82□□□□□ -0.36
Lrrtm1Q8K377 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lrrtm1Q8K377 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.82□□□□□ -0.36
Lrrtm1Q8K377 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Lrrtm1Q8K377 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lrrtm1Q8K377 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lrrtm1Q8K377 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lrrtm1Q8K377 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lrrtm1Q8K377 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Lrrtm1Q8K377 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lrrtm1Q8K377 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lrrtm1Q8K377 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Lrrtm1Q8K377 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lrrtm1Q8K377 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Lrrtm1Q8K377 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC12.81□□□□□ -0.36
Lrrtm1Q8K377 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lrrtm1Q8K377 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lrrtm1Q8K377 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lrrtm1Q8K377 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lrrtm1Q8K377 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lrrtm1Q8K377 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lrrtm1Q8K377 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lrrtm1Q8K377 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lrrtm1Q8K377 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lrrtm1Q8K377 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lrrtm1Q8K377 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Lrrtm1Q8K377 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Lrrtm1Q8K377 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lrrtm1Q8K377 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lrrtm1Q8K377 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Lrrtm1Q8K377 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lrrtm1Q8K377 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC12.81□□□□□ -0.36
Lrrtm1Q8K377 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Lrrtm1Q8K377 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lrrtm1Q8K377 Gm29518-201ENSMUST00000190858 372 ntBASIC12.81□□□□□ -0.36
Lrrtm1Q8K377 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC12.81□□□□□ -0.36
Lrrtm1Q8K377 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lrrtm1Q8K377 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lrrtm1Q8K377 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC12.81□□□□□ -0.36
Lrrtm1Q8K377 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC12.81□□□□□ -0.36
Lrrtm1Q8K377 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lrrtm1Q8K377 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lrrtm1Q8K377 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Lrrtm1Q8K377 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC12.81□□□□□ -0.36
Lrrtm1Q8K377 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lrrtm1Q8K377 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Lrrtm1Q8K377 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.81□□□□□ -0.36
Lrrtm1Q8K377 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lrrtm1Q8K377 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Lrrtm1Q8K377 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lrrtm1Q8K377 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Lrrtm1Q8K377 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lrrtm1Q8K377 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Lrrtm1Q8K377 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lrrtm1Q8K377 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Lrrtm1Q8K377 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lrrtm1Q8K377 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lrrtm1Q8K377 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lrrtm1Q8K377 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Lrrtm1Q8K377 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lrrtm1Q8K377 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lrrtm1Q8K377 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lrrtm1Q8K377 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lrrtm1Q8K377 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lrrtm1Q8K377 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lrrtm1Q8K377 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lrrtm1Q8K377 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lrrtm1Q8K377 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lrrtm1Q8K377 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lrrtm1Q8K377 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lrrtm1Q8K377 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.8□□□□□ -0.36
Lrrtm1Q8K377 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lrrtm1Q8K377 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Lrrtm1Q8K377 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lrrtm1Q8K377 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lrrtm1Q8K377 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lrrtm1Q8K377 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lrrtm1Q8K377 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lrrtm1Q8K377 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lrrtm1Q8K377 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lrrtm1Q8K377 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lrrtm1Q8K377 Ighv6-1-201ENSMUST00000193612 343 ntBASIC12.8□□□□□ -0.36
Lrrtm1Q8K377 Gm19164-201ENSMUST00000210667 640 ntBASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms