Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cchcr1Q8K2I2 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cchcr1Q8K2I2 Umpk-ps-201ENSMUST00000211897 827 ntBASIC17.65■□□□□ 0.42
Cchcr1Q8K2I2 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC17.65■□□□□ 0.42
Cchcr1Q8K2I2 AC164567.1-201ENSMUST00000219185 960 ntBASIC17.65■□□□□ 0.42
Cchcr1Q8K2I2 AC147366.1-201ENSMUST00000227671 852 ntBASIC17.65■□□□□ 0.42
Cchcr1Q8K2I2 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cchcr1Q8K2I2 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cchcr1Q8K2I2 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cchcr1Q8K2I2 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC17.65■□□□□ 0.42
Cchcr1Q8K2I2 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cchcr1Q8K2I2 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
Cchcr1Q8K2I2 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Cchcr1Q8K2I2 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cchcr1Q8K2I2 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Cchcr1Q8K2I2 Gm45760-201ENSMUST00000212190 1782 ntBASIC17.65■□□□□ 0.42
Cchcr1Q8K2I2 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cchcr1Q8K2I2 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cchcr1Q8K2I2 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cchcr1Q8K2I2 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cchcr1Q8K2I2 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cchcr1Q8K2I2 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cchcr1Q8K2I2 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cchcr1Q8K2I2 Gm37912-201ENSMUST00000191895 3076 ntBASIC17.64■□□□□ 0.41
Cchcr1Q8K2I2 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cchcr1Q8K2I2 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cchcr1Q8K2I2 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cchcr1Q8K2I2 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Cchcr1Q8K2I2 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cchcr1Q8K2I2 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Cchcr1Q8K2I2 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Cchcr1Q8K2I2 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cchcr1Q8K2I2 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cchcr1Q8K2I2 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cchcr1Q8K2I2 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cchcr1Q8K2I2 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cchcr1Q8K2I2 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Cchcr1Q8K2I2 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cchcr1Q8K2I2 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cchcr1Q8K2I2 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.41
Cchcr1Q8K2I2 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cchcr1Q8K2I2 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cchcr1Q8K2I2 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cchcr1Q8K2I2 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cchcr1Q8K2I2 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cchcr1Q8K2I2 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cchcr1Q8K2I2 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Cchcr1Q8K2I2 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cchcr1Q8K2I2 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cchcr1Q8K2I2 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Cchcr1Q8K2I2 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cchcr1Q8K2I2 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cchcr1Q8K2I2 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cchcr1Q8K2I2 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cchcr1Q8K2I2 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cchcr1Q8K2I2 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.63■□□□□ 0.41
Cchcr1Q8K2I2 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cchcr1Q8K2I2 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC17.63■□□□□ 0.41
Cchcr1Q8K2I2 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC17.63■□□□□ 0.41
Cchcr1Q8K2I2 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cchcr1Q8K2I2 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.63■□□□□ 0.41
Cchcr1Q8K2I2 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cchcr1Q8K2I2 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cchcr1Q8K2I2 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cchcr1Q8K2I2 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cchcr1Q8K2I2 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cchcr1Q8K2I2 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cchcr1Q8K2I2 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cchcr1Q8K2I2 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC17.62■□□□□ 0.41
Cchcr1Q8K2I2 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Cchcr1Q8K2I2 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cchcr1Q8K2I2 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cchcr1Q8K2I2 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cchcr1Q8K2I2 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cchcr1Q8K2I2 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC17.62■□□□□ 0.41
Cchcr1Q8K2I2 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cchcr1Q8K2I2 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cchcr1Q8K2I2 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC17.62■□□□□ 0.41
Cchcr1Q8K2I2 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC17.62■□□□□ 0.41
Cchcr1Q8K2I2 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cchcr1Q8K2I2 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Cchcr1Q8K2I2 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cchcr1Q8K2I2 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cchcr1Q8K2I2 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Cchcr1Q8K2I2 Gm42632-201ENSMUST00000201707 2411 ntBASIC17.62■□□□□ 0.41
Cchcr1Q8K2I2 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cchcr1Q8K2I2 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cchcr1Q8K2I2 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cchcr1Q8K2I2 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cchcr1Q8K2I2 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC17.62■□□□□ 0.41
Cchcr1Q8K2I2 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cchcr1Q8K2I2 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cchcr1Q8K2I2 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cchcr1Q8K2I2 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cchcr1Q8K2I2 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC17.61■□□□□ 0.41
Cchcr1Q8K2I2 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cchcr1Q8K2I2 AC130669.1-201ENSMUST00000228537 1672 ntBASIC17.61■□□□□ 0.41
Cchcr1Q8K2I2 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cchcr1Q8K2I2 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cchcr1Q8K2I2 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms