Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Rfwd3Q8CIK8 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.04□□□□□ -0.16
Rfwd3Q8CIK8 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfwd3Q8CIK8 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Rfwd3Q8CIK8 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfwd3Q8CIK8 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Rfwd3Q8CIK8 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfwd3Q8CIK8 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rfwd3Q8CIK8 Gm27525-201ENSMUST00000184465 107 ntBASIC14.04□□□□□ -0.16
Rfwd3Q8CIK8 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rfwd3Q8CIK8 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rfwd3Q8CIK8 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfwd3Q8CIK8 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Rfwd3Q8CIK8 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Rfwd3Q8CIK8 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfwd3Q8CIK8 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.04□□□□□ -0.16
Rfwd3Q8CIK8 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfwd3Q8CIK8 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfwd3Q8CIK8 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfwd3Q8CIK8 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfwd3Q8CIK8 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rfwd3Q8CIK8 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfwd3Q8CIK8 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfwd3Q8CIK8 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.03□□□□□ -0.16
Rfwd3Q8CIK8 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfwd3Q8CIK8 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfwd3Q8CIK8 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfwd3Q8CIK8 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfwd3Q8CIK8 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rfwd3Q8CIK8 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rfwd3Q8CIK8 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfwd3Q8CIK8 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Rfwd3Q8CIK8 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfwd3Q8CIK8 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfwd3Q8CIK8 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.03□□□□□ -0.16
Rfwd3Q8CIK8 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfwd3Q8CIK8 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.03□□□□□ -0.16
Rfwd3Q8CIK8 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfwd3Q8CIK8 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfwd3Q8CIK8 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Rfwd3Q8CIK8 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfwd3Q8CIK8 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rfwd3Q8CIK8 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rfwd3Q8CIK8 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Rfwd3Q8CIK8 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rfwd3Q8CIK8 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfwd3Q8CIK8 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.03□□□□□ -0.16
Rfwd3Q8CIK8 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.03□□□□□ -0.16
Rfwd3Q8CIK8 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfwd3Q8CIK8 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rfwd3Q8CIK8 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.03□□□□□ -0.16
Rfwd3Q8CIK8 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Rfwd3Q8CIK8 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Rfwd3Q8CIK8 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rfwd3Q8CIK8 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rfwd3Q8CIK8 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rfwd3Q8CIK8 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rfwd3Q8CIK8 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rfwd3Q8CIK8 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rfwd3Q8CIK8 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rfwd3Q8CIK8 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rfwd3Q8CIK8 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rfwd3Q8CIK8 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rfwd3Q8CIK8 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rfwd3Q8CIK8 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rfwd3Q8CIK8 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rfwd3Q8CIK8 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Rfwd3Q8CIK8 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Rfwd3Q8CIK8 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.02□□□□□ -0.16
Rfwd3Q8CIK8 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rfwd3Q8CIK8 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rfwd3Q8CIK8 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rfwd3Q8CIK8 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rfwd3Q8CIK8 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rfwd3Q8CIK8 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rfwd3Q8CIK8 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rfwd3Q8CIK8 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rfwd3Q8CIK8 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rfwd3Q8CIK8 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.02□□□□□ -0.17
Rfwd3Q8CIK8 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rfwd3Q8CIK8 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Rfwd3Q8CIK8 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rfwd3Q8CIK8 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Rfwd3Q8CIK8 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.02□□□□□ -0.17
Rfwd3Q8CIK8 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rfwd3Q8CIK8 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rfwd3Q8CIK8 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rfwd3Q8CIK8 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rfwd3Q8CIK8 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Rfwd3Q8CIK8 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfwd3Q8CIK8 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.01□□□□□ -0.17
Rfwd3Q8CIK8 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Rfwd3Q8CIK8 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfwd3Q8CIK8 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfwd3Q8CIK8 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfwd3Q8CIK8 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfwd3Q8CIK8 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfwd3Q8CIK8 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfwd3Q8CIK8 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.01□□□□□ -0.17
Rfwd3Q8CIK8 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms