Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Clip4Q8CI96 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Clip4Q8CI96 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Clip4Q8CI96 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Clip4Q8CI96 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC15.05■□□□□ 0
Clip4Q8CI96 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC15.05■□□□□ 0
Clip4Q8CI96 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC15.05■□□□□ 0
Clip4Q8CI96 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Clip4Q8CI96 Gm27525-201ENSMUST00000184465 107 ntBASIC15.05■□□□□ -0
Clip4Q8CI96 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC15.05■□□□□ -0
Clip4Q8CI96 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC15.05■□□□□ -0
Clip4Q8CI96 Gm5364-201ENSMUST00000216789 889 ntBASIC15.05■□□□□ -0
Clip4Q8CI96 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Clip4Q8CI96 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Clip4Q8CI96 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Clip4Q8CI96 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Clip4Q8CI96 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Clip4Q8CI96 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Clip4Q8CI96 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Clip4Q8CI96 Gm45504-201ENSMUST00000211407 2107 ntBASIC15.05■□□□□ -0
Clip4Q8CI96 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC15.05■□□□□ -0
Clip4Q8CI96 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15.05■□□□□ -0
Clip4Q8CI96 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Clip4Q8CI96 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Clip4Q8CI96 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.05■□□□□ -0
Clip4Q8CI96 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC15.05■□□□□ -0
Clip4Q8CI96 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Clip4Q8CI96 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC15.05■□□□□ -0
Clip4Q8CI96 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Clip4Q8CI96 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Clip4Q8CI96 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Clip4Q8CI96 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Clip4Q8CI96 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Clip4Q8CI96 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Clip4Q8CI96 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Clip4Q8CI96 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Clip4Q8CI96 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Clip4Q8CI96 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Clip4Q8CI96 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.04■□□□□ -0
Clip4Q8CI96 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Clip4Q8CI96 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Clip4Q8CI96 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Clip4Q8CI96 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Clip4Q8CI96 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Clip4Q8CI96 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC15.04■□□□□ -0
Clip4Q8CI96 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.04■□□□□ -0
Clip4Q8CI96 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
Clip4Q8CI96 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Clip4Q8CI96 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.04■□□□□ -0
Clip4Q8CI96 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
Clip4Q8CI96 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.04■□□□□ -0
Clip4Q8CI96 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Clip4Q8CI96 AC154222.1-201ENSMUST00000223882 475 ntBASIC15.04■□□□□ -0
Clip4Q8CI96 Psmb5-202ENSMUST00000227257 622 ntBASIC15.04■□□□□ -0
Clip4Q8CI96 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Clip4Q8CI96 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Clip4Q8CI96 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Clip4Q8CI96 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Clip4Q8CI96 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Clip4Q8CI96 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Clip4Q8CI96 Grk6-207ENSMUST00000225925 2769 ntBASIC15.04■□□□□ -0
Clip4Q8CI96 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Clip4Q8CI96 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Clip4Q8CI96 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Clip4Q8CI96 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC15.04■□□□□ -0
Clip4Q8CI96 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Clip4Q8CI96 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Clip4Q8CI96 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Clip4Q8CI96 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Clip4Q8CI96 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Clip4Q8CI96 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Clip4Q8CI96 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Clip4Q8CI96 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Clip4Q8CI96 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.03■□□□□ -0
Clip4Q8CI96 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Clip4Q8CI96 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Clip4Q8CI96 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Clip4Q8CI96 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Clip4Q8CI96 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Clip4Q8CI96 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.03■□□□□ -0
Clip4Q8CI96 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Clip4Q8CI96 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC15.03■□□□□ -0
Clip4Q8CI96 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.03■□□□□ -0
Clip4Q8CI96 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC15.03■□□□□ -0
Clip4Q8CI96 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.03■□□□□ -0
Clip4Q8CI96 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Clip4Q8CI96 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC15.03■□□□□ -0
Clip4Q8CI96 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Clip4Q8CI96 Gm37153-201ENSMUST00000193637 231 ntBASIC15.03■□□□□ -0
Clip4Q8CI96 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC15.03■□□□□ -0
Clip4Q8CI96 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Clip4Q8CI96 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Clip4Q8CI96 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15.03■□□□□ -0
Clip4Q8CI96 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Clip4Q8CI96 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Clip4Q8CI96 Camk2g-217ENSMUST00000226630 1937 ntBASIC15.03■□□□□ -0
Clip4Q8CI96 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Clip4Q8CI96 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Clip4Q8CI96 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Clip4Q8CI96 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms