Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.76□□□□□ -0.05
Ccdc28bQ8CEG5 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc28bQ8CEG5 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.76□□□□□ -0.05
Ccdc28bQ8CEG5 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc28bQ8CEG5 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc28bQ8CEG5 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc28bQ8CEG5 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc28bQ8CEG5 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.76□□□□□ -0.05
Ccdc28bQ8CEG5 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc28bQ8CEG5 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.76□□□□□ -0.05
Ccdc28bQ8CEG5 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc28bQ8CEG5 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc28bQ8CEG5 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc28bQ8CEG5 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Ccdc28bQ8CEG5 Celf4-206ENSMUST00000224553 1729 ntBASIC14.75□□□□□ -0.05
Ccdc28bQ8CEG5 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc28bQ8CEG5 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Ccdc28bQ8CEG5 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Ccdc28bQ8CEG5 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Ccdc28bQ8CEG5 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc28bQ8CEG5 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc28bQ8CEG5 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Ccdc28bQ8CEG5 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.75□□□□□ -0.05
Ccdc28bQ8CEG5 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc28bQ8CEG5 Rprl3-201ENSMUST00000157400 290 ntBASIC14.75□□□□□ -0.05
Ccdc28bQ8CEG5 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc28bQ8CEG5 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.75□□□□□ -0.05
Ccdc28bQ8CEG5 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc28bQ8CEG5 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc28bQ8CEG5 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc28bQ8CEG5 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc28bQ8CEG5 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc28bQ8CEG5 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc28bQ8CEG5 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.74□□□□□ -0.05
Ccdc28bQ8CEG5 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc28bQ8CEG5 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc28bQ8CEG5 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc28bQ8CEG5 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc28bQ8CEG5 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc28bQ8CEG5 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc28bQ8CEG5 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc28bQ8CEG5 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Ccdc28bQ8CEG5 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc28bQ8CEG5 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc28bQ8CEG5 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc28bQ8CEG5 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc28bQ8CEG5 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Ccdc28bQ8CEG5 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc28bQ8CEG5 Gm8344-201ENSMUST00000119813 856 ntBASIC14.74□□□□□ -0.05
Ccdc28bQ8CEG5 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc28bQ8CEG5 Gm44454-201ENSMUST00000198541 138 ntBASIC14.74□□□□□ -0.05
Ccdc28bQ8CEG5 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc28bQ8CEG5 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc28bQ8CEG5 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc28bQ8CEG5 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc28bQ8CEG5 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc28bQ8CEG5 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc28bQ8CEG5 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc28bQ8CEG5 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc28bQ8CEG5 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc28bQ8CEG5 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc28bQ8CEG5 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc28bQ8CEG5 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.74□□□□□ -0.05
Ccdc28bQ8CEG5 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc28bQ8CEG5 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc28bQ8CEG5 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc28bQ8CEG5 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Ccdc28bQ8CEG5 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc28bQ8CEG5 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc28bQ8CEG5 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc28bQ8CEG5 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc28bQ8CEG5 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc28bQ8CEG5 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc28bQ8CEG5 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc28bQ8CEG5 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc28bQ8CEG5 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc28bQ8CEG5 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc28bQ8CEG5 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.73□□□□□ -0.05
Ccdc28bQ8CEG5 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Ccdc28bQ8CEG5 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc28bQ8CEG5 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc28bQ8CEG5 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc28bQ8CEG5 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc28bQ8CEG5 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc28bQ8CEG5 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc28bQ8CEG5 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc28bQ8CEG5 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc28bQ8CEG5 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc28bQ8CEG5 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc28bQ8CEG5 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc28bQ8CEG5 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc28bQ8CEG5 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc28bQ8CEG5 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc28bQ8CEG5 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc28bQ8CEG5 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc28bQ8CEG5 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc28bQ8CEG5 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc28bQ8CEG5 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc28bQ8CEG5 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc28bQ8CEG5 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms