Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc60Q8C4J0 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc60Q8C4J0 Gm15427-201ENSMUST00000117288 531 ntBASIC19.02■□□□□ 0.64
Ccdc60Q8C4J0 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC19.02■□□□□ 0.64
Ccdc60Q8C4J0 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC19.02■□□□□ 0.64
Ccdc60Q8C4J0 Gm17271-201ENSMUST00000165535 355 ntBASIC19.02■□□□□ 0.64
Ccdc60Q8C4J0 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc60Q8C4J0 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc60Q8C4J0 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc60Q8C4J0 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc60Q8C4J0 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ccdc60Q8C4J0 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ccdc60Q8C4J0 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc60Q8C4J0 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc60Q8C4J0 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc60Q8C4J0 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc60Q8C4J0 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Ccdc60Q8C4J0 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Ccdc60Q8C4J0 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc60Q8C4J0 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc60Q8C4J0 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Ccdc60Q8C4J0 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc60Q8C4J0 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC19.01■□□□□ 0.63
Ccdc60Q8C4J0 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc60Q8C4J0 Gm6226-201ENSMUST00000117765 1146 ntBASIC19.01■□□□□ 0.63
Ccdc60Q8C4J0 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC19.01■□□□□ 0.63
Ccdc60Q8C4J0 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC19.01■□□□□ 0.63
Ccdc60Q8C4J0 Gm16026-204ENSMUST00000162652 683 ntBASIC19.01■□□□□ 0.63
Ccdc60Q8C4J0 Gm8597-201ENSMUST00000191525 1109 ntBASIC19.01■□□□□ 0.63
Ccdc60Q8C4J0 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC19.01■□□□□ 0.63
Ccdc60Q8C4J0 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc60Q8C4J0 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc60Q8C4J0 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc60Q8C4J0 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc60Q8C4J0 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc60Q8C4J0 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc60Q8C4J0 Gm37305-201ENSMUST00000195714 4279 ntBASIC19.01■□□□□ 0.63
Ccdc60Q8C4J0 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc60Q8C4J0 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc60Q8C4J0 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Ccdc60Q8C4J0 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc60Q8C4J0 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Ccdc60Q8C4J0 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc60Q8C4J0 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc60Q8C4J0 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC19■□□□□ 0.63
Ccdc60Q8C4J0 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Ccdc60Q8C4J0 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc60Q8C4J0 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc60Q8C4J0 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc60Q8C4J0 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC19■□□□□ 0.63
Ccdc60Q8C4J0 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC19■□□□□ 0.63
Ccdc60Q8C4J0 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC19■□□□□ 0.63
Ccdc60Q8C4J0 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC19■□□□□ 0.63
Ccdc60Q8C4J0 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc60Q8C4J0 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc60Q8C4J0 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Ccdc60Q8C4J0 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc60Q8C4J0 Camk2g-217ENSMUST00000226630 1937 ntBASIC19■□□□□ 0.63
Ccdc60Q8C4J0 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Ccdc60Q8C4J0 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc60Q8C4J0 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc60Q8C4J0 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc60Q8C4J0 Gm9768-201ENSMUST00000206007 2861 ntBASIC18.99■□□□□ 0.63
Ccdc60Q8C4J0 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Ccdc60Q8C4J0 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc60Q8C4J0 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC18.99■□□□□ 0.63
Ccdc60Q8C4J0 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Ccdc60Q8C4J0 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc60Q8C4J0 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc60Q8C4J0 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc60Q8C4J0 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc60Q8C4J0 Gm4913-201ENSMUST00000117075 1290 ntBASIC18.99■□□□□ 0.63
Ccdc60Q8C4J0 Rpph1-201ENSMUST00000175096 319 ntBASIC18.99■□□□□ 0.63
Ccdc60Q8C4J0 Gm20553-201ENSMUST00000204205 844 ntBASIC18.99■□□□□ 0.63
Ccdc60Q8C4J0 AC132104.2-201ENSMUST00000215011 266 ntBASIC18.99■□□□□ 0.63
Ccdc60Q8C4J0 CT025555.1-201ENSMUST00000225901 1217 ntBASIC18.99■□□□□ 0.63
Ccdc60Q8C4J0 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Ccdc60Q8C4J0 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc60Q8C4J0 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc60Q8C4J0 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc60Q8C4J0 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
Ccdc60Q8C4J0 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc60Q8C4J0 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc60Q8C4J0 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc60Q8C4J0 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc60Q8C4J0 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc60Q8C4J0 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc60Q8C4J0 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc60Q8C4J0 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Ccdc60Q8C4J0 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc60Q8C4J0 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc60Q8C4J0 Gm5357-201ENSMUST00000212720 1924 ntBASIC18.98■□□□□ 0.63
Ccdc60Q8C4J0 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc60Q8C4J0 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc60Q8C4J0 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc60Q8C4J0 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc60Q8C4J0 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC18.98■□□□□ 0.63
Ccdc60Q8C4J0 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc60Q8C4J0 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc60Q8C4J0 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms