Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Gm12134-201ENSMUST00000122109 520 ntBASIC13.33□□□□□ -0.28
Rft1Q8C3B8 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rft1Q8C3B8 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rft1Q8C3B8 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC13.33□□□□□ -0.28
Rft1Q8C3B8 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC13.33□□□□□ -0.28
Rft1Q8C3B8 Gm7506-201ENSMUST00000207758 815 ntBASIC13.33□□□□□ -0.28
Rft1Q8C3B8 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC13.33□□□□□ -0.28
Rft1Q8C3B8 Gm9172-201ENSMUST00000212092 954 ntBASIC13.33□□□□□ -0.28
Rft1Q8C3B8 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rft1Q8C3B8 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rft1Q8C3B8 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rft1Q8C3B8 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rft1Q8C3B8 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Rft1Q8C3B8 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rft1Q8C3B8 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rft1Q8C3B8 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Rft1Q8C3B8 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.33□□□□□ -0.28
Rft1Q8C3B8 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rft1Q8C3B8 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rft1Q8C3B8 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rft1Q8C3B8 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rft1Q8C3B8 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rft1Q8C3B8 Gm11839-201ENSMUST00000120647 1953 ntBASIC13.32□□□□□ -0.28
Rft1Q8C3B8 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Rft1Q8C3B8 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rft1Q8C3B8 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rft1Q8C3B8 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rft1Q8C3B8 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rft1Q8C3B8 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rft1Q8C3B8 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rft1Q8C3B8 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rft1Q8C3B8 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rft1Q8C3B8 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rft1Q8C3B8 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rft1Q8C3B8 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rft1Q8C3B8 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Rft1Q8C3B8 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC13.32□□□□□ -0.28
Rft1Q8C3B8 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rft1Q8C3B8 Vti1a-206ENSMUST00000225529 1244 ntBASIC13.32□□□□□ -0.28
Rft1Q8C3B8 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rft1Q8C3B8 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.32□□□□□ -0.28
Rft1Q8C3B8 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rft1Q8C3B8 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.32□□□□□ -0.28
Rft1Q8C3B8 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.32□□□□□ -0.28
Rft1Q8C3B8 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Rft1Q8C3B8 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Rft1Q8C3B8 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Rft1Q8C3B8 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Rft1Q8C3B8 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rft1Q8C3B8 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rft1Q8C3B8 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rft1Q8C3B8 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rft1Q8C3B8 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rft1Q8C3B8 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rft1Q8C3B8 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.32□□□□□ -0.28
Rft1Q8C3B8 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rft1Q8C3B8 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rft1Q8C3B8 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rft1Q8C3B8 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rft1Q8C3B8 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rft1Q8C3B8 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rft1Q8C3B8 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rft1Q8C3B8 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rft1Q8C3B8 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rft1Q8C3B8 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.31□□□□□ -0.28
Rft1Q8C3B8 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rft1Q8C3B8 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Rft1Q8C3B8 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rft1Q8C3B8 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rft1Q8C3B8 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rft1Q8C3B8 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rft1Q8C3B8 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rft1Q8C3B8 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC13.31□□□□□ -0.28
Rft1Q8C3B8 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Rft1Q8C3B8 Gm11452-201ENSMUST00000122376 690 ntBASIC13.31□□□□□ -0.28
Rft1Q8C3B8 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC13.31□□□□□ -0.28
Rft1Q8C3B8 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rft1Q8C3B8 AC164629.2-201ENSMUST00000217916 270 ntBASIC13.31□□□□□ -0.28
Rft1Q8C3B8 Rbfox2-207ENSMUST00000227533 1041 ntBASIC13.31□□□□□ -0.28
Rft1Q8C3B8 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Rft1Q8C3B8 Rps4l-201ENSMUST00000071745 943 ntBASIC13.31□□□□□ -0.28
Rft1Q8C3B8 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rft1Q8C3B8 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rft1Q8C3B8 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rft1Q8C3B8 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rft1Q8C3B8 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rft1Q8C3B8 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rft1Q8C3B8 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rft1Q8C3B8 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rft1Q8C3B8 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rft1Q8C3B8 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC13.31□□□□□ -0.28
Rft1Q8C3B8 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Rft1Q8C3B8 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rft1Q8C3B8 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rft1Q8C3B8 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Rft1Q8C3B8 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Rft1Q8C3B8 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rft1Q8C3B8 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rft1Q8C3B8 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Rft1Q8C3B8 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms