Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Tsen54Q8C2A2 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tsen54Q8C2A2 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Tsen54Q8C2A2 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tsen54Q8C2A2 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC12.52□□□□□ -0.41
Tsen54Q8C2A2 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tsen54Q8C2A2 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tsen54Q8C2A2 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Tsen54Q8C2A2 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.52□□□□□ -0.41
Tsen54Q8C2A2 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tsen54Q8C2A2 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tsen54Q8C2A2 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tsen54Q8C2A2 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Tsen54Q8C2A2 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tsen54Q8C2A2 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Tsen54Q8C2A2 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Tsen54Q8C2A2 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tsen54Q8C2A2 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tsen54Q8C2A2 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Tsen54Q8C2A2 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Tsen54Q8C2A2 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tsen54Q8C2A2 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tsen54Q8C2A2 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Tsen54Q8C2A2 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Tsen54Q8C2A2 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Tsen54Q8C2A2 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tsen54Q8C2A2 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC12.51□□□□□ -0.41
Tsen54Q8C2A2 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tsen54Q8C2A2 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tsen54Q8C2A2 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC12.51□□□□□ -0.41
Tsen54Q8C2A2 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tsen54Q8C2A2 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Tsen54Q8C2A2 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Tsen54Q8C2A2 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Tsen54Q8C2A2 Gm27742-201ENSMUST00000184667 60 ntBASIC12.51□□□□□ -0.41
Tsen54Q8C2A2 AC125350.1-201ENSMUST00000225115 903 ntBASIC12.51□□□□□ -0.41
Tsen54Q8C2A2 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tsen54Q8C2A2 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tsen54Q8C2A2 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Tsen54Q8C2A2 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tsen54Q8C2A2 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Tsen54Q8C2A2 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Tsen54Q8C2A2 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Tsen54Q8C2A2 Zkscan4-202ENSMUST00000225845 1506 ntBASIC12.51□□□□□ -0.41
Tsen54Q8C2A2 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Tsen54Q8C2A2 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tsen54Q8C2A2 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Tsen54Q8C2A2 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tsen54Q8C2A2 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Tsen54Q8C2A2 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Tsen54Q8C2A2 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tsen54Q8C2A2 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tsen54Q8C2A2 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tsen54Q8C2A2 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tsen54Q8C2A2 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tsen54Q8C2A2 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tsen54Q8C2A2 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Tsen54Q8C2A2 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tsen54Q8C2A2 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tsen54Q8C2A2 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Tsen54Q8C2A2 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.5□□□□□ -0.41
Tsen54Q8C2A2 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tsen54Q8C2A2 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tsen54Q8C2A2 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Tsen54Q8C2A2 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC12.5□□□□□ -0.41
Tsen54Q8C2A2 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Tsen54Q8C2A2 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tsen54Q8C2A2 Gm10052-201ENSMUST00000168019 960 ntBASIC12.5□□□□□ -0.41
Tsen54Q8C2A2 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tsen54Q8C2A2 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC12.5□□□□□ -0.41
Tsen54Q8C2A2 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Tsen54Q8C2A2 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tsen54Q8C2A2 Gm7729-201ENSMUST00000050143 801 ntBASIC12.5□□□□□ -0.41
Tsen54Q8C2A2 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tsen54Q8C2A2 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tsen54Q8C2A2 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Tsen54Q8C2A2 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Tsen54Q8C2A2 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tsen54Q8C2A2 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tsen54Q8C2A2 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Tsen54Q8C2A2 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.5□□□□□ -0.41
Tsen54Q8C2A2 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC12.5□□□□□ -0.41
Tsen54Q8C2A2 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Tsen54Q8C2A2 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Tsen54Q8C2A2 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tsen54Q8C2A2 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tsen54Q8C2A2 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Tsen54Q8C2A2 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tsen54Q8C2A2 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tsen54Q8C2A2 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Tsen54Q8C2A2 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tsen54Q8C2A2 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tsen54Q8C2A2 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tsen54Q8C2A2 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tsen54Q8C2A2 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tsen54Q8C2A2 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tsen54Q8C2A2 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tsen54Q8C2A2 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tsen54Q8C2A2 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tsen54Q8C2A2 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms