Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm20910-201ENSMUST00000193268 696 ntBASIC20.38■□□□□ 0.85
Usp40Q8BWR4 Gm21871-201ENSMUST00000194621 696 ntBASIC20.38■□□□□ 0.85
Usp40Q8BWR4 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC20.38■□□□□ 0.85
Usp40Q8BWR4 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp40Q8BWR4 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp40Q8BWR4 Gm2423-201ENSMUST00000074863 733 ntBASIC20.38■□□□□ 0.85
Usp40Q8BWR4 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp40Q8BWR4 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Usp40Q8BWR4 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp40Q8BWR4 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp40Q8BWR4 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp40Q8BWR4 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp40Q8BWR4 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Usp40Q8BWR4 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp40Q8BWR4 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp40Q8BWR4 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC20.37■□□□□ 0.85
Usp40Q8BWR4 Tfap2a-203ENSMUST00000223869 2037 ntBASIC20.37■□□□□ 0.85
Usp40Q8BWR4 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Usp40Q8BWR4 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Usp40Q8BWR4 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Usp40Q8BWR4 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp40Q8BWR4 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp40Q8BWR4 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Usp40Q8BWR4 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp40Q8BWR4 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Usp40Q8BWR4 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Usp40Q8BWR4 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp40Q8BWR4 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp40Q8BWR4 Olfr286-202ENSMUST00000205305 969 ntBASIC20.37■□□□□ 0.85
Usp40Q8BWR4 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC20.37■□□□□ 0.85
Usp40Q8BWR4 AC090659.2-201ENSMUST00000225378 1186 ntBASIC20.37■□□□□ 0.85
Usp40Q8BWR4 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp40Q8BWR4 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Usp40Q8BWR4 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp40Q8BWR4 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp40Q8BWR4 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
Usp40Q8BWR4 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Usp40Q8BWR4 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp40Q8BWR4 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp40Q8BWR4 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Usp40Q8BWR4 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Usp40Q8BWR4 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp40Q8BWR4 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp40Q8BWR4 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Usp40Q8BWR4 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp40Q8BWR4 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Usp40Q8BWR4 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Usp40Q8BWR4 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Usp40Q8BWR4 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp40Q8BWR4 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Usp40Q8BWR4 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC20.36■□□□□ 0.85
Usp40Q8BWR4 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC20.36■□□□□ 0.85
Usp40Q8BWR4 Gm5866-201ENSMUST00000177881 973 ntBASIC20.36■□□□□ 0.85
Usp40Q8BWR4 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC20.36■□□□□ 0.85
Usp40Q8BWR4 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Usp40Q8BWR4 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Usp40Q8BWR4 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp40Q8BWR4 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp40Q8BWR4 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Usp40Q8BWR4 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp40Q8BWR4 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC20.36■□□□□ 0.85
Usp40Q8BWR4 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp40Q8BWR4 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp40Q8BWR4 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Usp40Q8BWR4 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp40Q8BWR4 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Usp40Q8BWR4 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Usp40Q8BWR4 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC20.35■□□□□ 0.85
Usp40Q8BWR4 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC20.35■□□□□ 0.85
Usp40Q8BWR4 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp40Q8BWR4 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Usp40Q8BWR4 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp40Q8BWR4 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Usp40Q8BWR4 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp40Q8BWR4 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp40Q8BWR4 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp40Q8BWR4 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Usp40Q8BWR4 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Usp40Q8BWR4 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp40Q8BWR4 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp40Q8BWR4 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC20.34■□□□□ 0.85
Usp40Q8BWR4 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Usp40Q8BWR4 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp40Q8BWR4 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Usp40Q8BWR4 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp40Q8BWR4 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp40Q8BWR4 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp40Q8BWR4 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp40Q8BWR4 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Usp40Q8BWR4 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp40Q8BWR4 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Usp40Q8BWR4 Gm14719-201ENSMUST00000121891 340 ntBASIC20.34■□□□□ 0.85
Usp40Q8BWR4 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC20.34■□□□□ 0.85
Usp40Q8BWR4 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC20.34■□□□□ 0.85
Usp40Q8BWR4 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC20.34■□□□□ 0.85
Usp40Q8BWR4 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Usp40Q8BWR4 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Usp40Q8BWR4 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Usp40Q8BWR4 Gm37230-201ENSMUST00000194491 818 ntBASIC20.34■□□□□ 0.85
Usp40Q8BWR4 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms