Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ckap4Q8BMK4 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ckap4Q8BMK4 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Ckap4Q8BMK4 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ckap4Q8BMK4 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Ckap4Q8BMK4 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ckap4Q8BMK4 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ckap4Q8BMK4 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ckap4Q8BMK4 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ckap4Q8BMK4 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ckap4Q8BMK4 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ckap4Q8BMK4 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC14.14□□□□□ -0.15
Ckap4Q8BMK4 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ckap4Q8BMK4 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.14□□□□□ -0.15
Ckap4Q8BMK4 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.14□□□□□ -0.15
Ckap4Q8BMK4 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.14□□□□□ -0.15
Ckap4Q8BMK4 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ckap4Q8BMK4 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ckap4Q8BMK4 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Ckap4Q8BMK4 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ckap4Q8BMK4 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ckap4Q8BMK4 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ckap4Q8BMK4 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ckap4Q8BMK4 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ckap4Q8BMK4 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.14□□□□□ -0.15
Ckap4Q8BMK4 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ckap4Q8BMK4 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ckap4Q8BMK4 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ckap4Q8BMK4 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ckap4Q8BMK4 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Ckap4Q8BMK4 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ckap4Q8BMK4 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ckap4Q8BMK4 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ckap4Q8BMK4 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Ckap4Q8BMK4 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ckap4Q8BMK4 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Ckap4Q8BMK4 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ckap4Q8BMK4 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ckap4Q8BMK4 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ckap4Q8BMK4 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Ckap4Q8BMK4 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ckap4Q8BMK4 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ckap4Q8BMK4 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ckap4Q8BMK4 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.13□□□□□ -0.15
Ckap4Q8BMK4 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.13□□□□□ -0.15
Ckap4Q8BMK4 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.13□□□□□ -0.15
Ckap4Q8BMK4 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ckap4Q8BMK4 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.13□□□□□ -0.15
Ckap4Q8BMK4 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.13□□□□□ -0.15
Ckap4Q8BMK4 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.13□□□□□ -0.15
Ckap4Q8BMK4 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.13□□□□□ -0.15
Ckap4Q8BMK4 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ckap4Q8BMK4 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.13□□□□□ -0.15
Ckap4Q8BMK4 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ckap4Q8BMK4 Gm10819-201ENSMUST00000099988 561 ntBASIC14.13□□□□□ -0.15
Ckap4Q8BMK4 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Ckap4Q8BMK4 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Ckap4Q8BMK4 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ckap4Q8BMK4 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ckap4Q8BMK4 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.13□□□□□ -0.15
Ckap4Q8BMK4 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ckap4Q8BMK4 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.13□□□□□ -0.15
Ckap4Q8BMK4 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ckap4Q8BMK4 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ckap4Q8BMK4 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ckap4Q8BMK4 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Ckap4Q8BMK4 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ckap4Q8BMK4 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.12□□□□□ -0.15
Ckap4Q8BMK4 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Ckap4Q8BMK4 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Ckap4Q8BMK4 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
Ckap4Q8BMK4 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ckap4Q8BMK4 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Ckap4Q8BMK4 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ckap4Q8BMK4 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Ckap4Q8BMK4 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
Ckap4Q8BMK4 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ckap4Q8BMK4 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Ckap4Q8BMK4 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.12□□□□□ -0.15
Ckap4Q8BMK4 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ckap4Q8BMK4 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.12□□□□□ -0.15
Ckap4Q8BMK4 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ckap4Q8BMK4 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ckap4Q8BMK4 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ckap4Q8BMK4 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Ckap4Q8BMK4 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ckap4Q8BMK4 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ckap4Q8BMK4 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ckap4Q8BMK4 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
Ckap4Q8BMK4 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ckap4Q8BMK4 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ckap4Q8BMK4 Birc2-201ENSMUST00000054878 378 ntBASIC14.12□□□□□ -0.15
Ckap4Q8BMK4 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ckap4Q8BMK4 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ckap4Q8BMK4 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Ckap4Q8BMK4 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
Ckap4Q8BMK4 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ckap4Q8BMK4 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Ckap4Q8BMK4 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Ckap4Q8BMK4 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms