Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Smg1Q8BKX6 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.44□□□□□ -0.42
Smg1Q8BKX6 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smg1Q8BKX6 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Smg1Q8BKX6 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.44□□□□□ -0.42
Smg1Q8BKX6 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Smg1Q8BKX6 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smg1Q8BKX6 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Smg1Q8BKX6 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smg1Q8BKX6 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smg1Q8BKX6 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Smg1Q8BKX6 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Smg1Q8BKX6 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smg1Q8BKX6 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC12.44□□□□□ -0.42
Smg1Q8BKX6 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Smg1Q8BKX6 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smg1Q8BKX6 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.44□□□□□ -0.42
Smg1Q8BKX6 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Smg1Q8BKX6 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Smg1Q8BKX6 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.44□□□□□ -0.42
Smg1Q8BKX6 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.44□□□□□ -0.42
Smg1Q8BKX6 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smg1Q8BKX6 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Smg1Q8BKX6 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Smg1Q8BKX6 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smg1Q8BKX6 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Smg1Q8BKX6 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smg1Q8BKX6 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smg1Q8BKX6 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Smg1Q8BKX6 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smg1Q8BKX6 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Smg1Q8BKX6 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.43□□□□□ -0.42
Smg1Q8BKX6 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smg1Q8BKX6 Gm7584-201ENSMUST00000175829 940 ntBASIC12.43□□□□□ -0.42
Smg1Q8BKX6 Gm27572-201ENSMUST00000183702 255 ntBASIC12.43□□□□□ -0.42
Smg1Q8BKX6 AA619741-201ENSMUST00000195095 646 ntBASIC12.43□□□□□ -0.42
Smg1Q8BKX6 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smg1Q8BKX6 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smg1Q8BKX6 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Smg1Q8BKX6 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smg1Q8BKX6 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smg1Q8BKX6 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Smg1Q8BKX6 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smg1Q8BKX6 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.43□□□□□ -0.42
Smg1Q8BKX6 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smg1Q8BKX6 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smg1Q8BKX6 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC12.43□□□□□ -0.42
Smg1Q8BKX6 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC12.43□□□□□ -0.42
Smg1Q8BKX6 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smg1Q8BKX6 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smg1Q8BKX6 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
Smg1Q8BKX6 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Smg1Q8BKX6 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smg1Q8BKX6 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC12.43□□□□□ -0.42
Smg1Q8BKX6 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smg1Q8BKX6 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smg1Q8BKX6 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.43□□□□□ -0.42
Smg1Q8BKX6 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Smg1Q8BKX6 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smg1Q8BKX6 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smg1Q8BKX6 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC12.43□□□□□ -0.42
Smg1Q8BKX6 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smg1Q8BKX6 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smg1Q8BKX6 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.42□□□□□ -0.42
Smg1Q8BKX6 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smg1Q8BKX6 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smg1Q8BKX6 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smg1Q8BKX6 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC12.42□□□□□ -0.42
Smg1Q8BKX6 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smg1Q8BKX6 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smg1Q8BKX6 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smg1Q8BKX6 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.42□□□□□ -0.42
Smg1Q8BKX6 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smg1Q8BKX6 Gm6091-201ENSMUST00000098307 165 ntBASIC12.42□□□□□ -0.42
Smg1Q8BKX6 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Smg1Q8BKX6 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smg1Q8BKX6 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smg1Q8BKX6 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smg1Q8BKX6 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smg1Q8BKX6 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smg1Q8BKX6 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Smg1Q8BKX6 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smg1Q8BKX6 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.42□□□□□ -0.42
Smg1Q8BKX6 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.42□□□□□ -0.42
Smg1Q8BKX6 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Smg1Q8BKX6 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Smg1Q8BKX6 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC12.42□□□□□ -0.42
Smg1Q8BKX6 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smg1Q8BKX6 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.42□□□□□ -0.42
Smg1Q8BKX6 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smg1Q8BKX6 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smg1Q8BKX6 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC12.41□□□□□ -0.42
Smg1Q8BKX6 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Smg1Q8BKX6 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Smg1Q8BKX6 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.41□□□□□ -0.42
Smg1Q8BKX6 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC12.41□□□□□ -0.42
Smg1Q8BKX6 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Smg1Q8BKX6 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Smg1Q8BKX6 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smg1Q8BKX6 Gm16011-201ENSMUST00000121567 2662 ntBASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms