Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc40Q8BI79 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc40Q8BI79 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc40Q8BI79 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Ccdc40Q8BI79 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc40Q8BI79 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc40Q8BI79 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc40Q8BI79 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc40Q8BI79 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc40Q8BI79 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc40Q8BI79 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Ccdc40Q8BI79 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc40Q8BI79 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc40Q8BI79 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc40Q8BI79 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc40Q8BI79 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC15.6■□□□□ 0.09
Ccdc40Q8BI79 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
Ccdc40Q8BI79 Gm7222-201ENSMUST00000117512 906 ntBASIC15.6■□□□□ 0.09
Ccdc40Q8BI79 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.6■□□□□ 0.09
Ccdc40Q8BI79 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.6■□□□□ 0.09
Ccdc40Q8BI79 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc40Q8BI79 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc40Q8BI79 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
Ccdc40Q8BI79 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc40Q8BI79 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc40Q8BI79 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc40Q8BI79 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.6■□□□□ 0.09
Ccdc40Q8BI79 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc40Q8BI79 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc40Q8BI79 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Ccdc40Q8BI79 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc40Q8BI79 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Ccdc40Q8BI79 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc40Q8BI79 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC15.59■□□□□ 0.09
Ccdc40Q8BI79 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc40Q8BI79 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc40Q8BI79 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc40Q8BI79 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc40Q8BI79 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc40Q8BI79 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc40Q8BI79 Gm18489-201ENSMUST00000172565 551 ntBASIC15.59■□□□□ 0.09
Ccdc40Q8BI79 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Ccdc40Q8BI79 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
Ccdc40Q8BI79 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc40Q8BI79 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc40Q8BI79 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC15.59■□□□□ 0.09
Ccdc40Q8BI79 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc40Q8BI79 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc40Q8BI79 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc40Q8BI79 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc40Q8BI79 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc40Q8BI79 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc40Q8BI79 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc40Q8BI79 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Ccdc40Q8BI79 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc40Q8BI79 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
Ccdc40Q8BI79 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ccdc40Q8BI79 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ccdc40Q8BI79 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc40Q8BI79 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc40Q8BI79 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC15.58■□□□□ 0.08
Ccdc40Q8BI79 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Ccdc40Q8BI79 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC15.58■□□□□ 0.08
Ccdc40Q8BI79 Gm37153-201ENSMUST00000193637 231 ntBASIC15.58■□□□□ 0.08
Ccdc40Q8BI79 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc40Q8BI79 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC15.58■□□□□ 0.08
Ccdc40Q8BI79 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc40Q8BI79 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc40Q8BI79 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc40Q8BI79 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc40Q8BI79 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc40Q8BI79 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC15.58■□□□□ 0.08
Ccdc40Q8BI79 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc40Q8BI79 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc40Q8BI79 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc40Q8BI79 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc40Q8BI79 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc40Q8BI79 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc40Q8BI79 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Ccdc40Q8BI79 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc40Q8BI79 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc40Q8BI79 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.57■□□□□ 0.08
Ccdc40Q8BI79 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
Ccdc40Q8BI79 Gm7230-201ENSMUST00000173026 815 ntBASIC15.57■□□□□ 0.08
Ccdc40Q8BI79 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc40Q8BI79 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc40Q8BI79 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc40Q8BI79 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.57■□□□□ 0.08
Ccdc40Q8BI79 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc40Q8BI79 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Ccdc40Q8BI79 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc40Q8BI79 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc40Q8BI79 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.57■□□□□ 0.08
Ccdc40Q8BI79 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Ccdc40Q8BI79 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc40Q8BI79 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc40Q8BI79 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc40Q8BI79 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc40Q8BI79 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc40Q8BI79 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms