Protein–RNA interactions for Protein: Q8BGR9

Ublcp1, Ubiquitin-like domain-containing CTD phosphatase 1, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ublcp1Q8BGR9 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ublcp1Q8BGR9 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC15.75■□□□□ 0.11
Ublcp1Q8BGR9 Gm23547-201ENSMUST00000158210 271 ntBASIC15.75■□□□□ 0.11
Ublcp1Q8BGR9 Mir3081-201ENSMUST00000175305 84 ntBASIC15.75■□□□□ 0.11
Ublcp1Q8BGR9 Gm29518-201ENSMUST00000190858 372 ntBASIC15.75■□□□□ 0.11
Ublcp1Q8BGR9 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ublcp1Q8BGR9 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ublcp1Q8BGR9 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ublcp1Q8BGR9 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ublcp1Q8BGR9 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ublcp1Q8BGR9 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ublcp1Q8BGR9 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC15.75■□□□□ 0.11
Ublcp1Q8BGR9 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC15.75■□□□□ 0.11
Ublcp1Q8BGR9 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ublcp1Q8BGR9 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ublcp1Q8BGR9 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC15.75■□□□□ 0.11
Ublcp1Q8BGR9 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Ublcp1Q8BGR9 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ublcp1Q8BGR9 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ublcp1Q8BGR9 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ublcp1Q8BGR9 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ublcp1Q8BGR9 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Ublcp1Q8BGR9 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ublcp1Q8BGR9 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ublcp1Q8BGR9 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ublcp1Q8BGR9 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC15.74■□□□□ 0.11
Ublcp1Q8BGR9 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ublcp1Q8BGR9 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ublcp1Q8BGR9 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC15.74■□□□□ 0.11
Ublcp1Q8BGR9 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ublcp1Q8BGR9 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ublcp1Q8BGR9 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ublcp1Q8BGR9 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.74■□□□□ 0.11
Ublcp1Q8BGR9 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.74■□□□□ 0.11
Ublcp1Q8BGR9 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.74■□□□□ 0.11
Ublcp1Q8BGR9 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC15.74■□□□□ 0.11
Ublcp1Q8BGR9 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.74■□□□□ 0.11
Ublcp1Q8BGR9 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ublcp1Q8BGR9 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Ublcp1Q8BGR9 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Ublcp1Q8BGR9 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC15.74■□□□□ 0.11
Ublcp1Q8BGR9 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC15.74■□□□□ 0.11
Ublcp1Q8BGR9 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ublcp1Q8BGR9 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ublcp1Q8BGR9 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ublcp1Q8BGR9 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ublcp1Q8BGR9 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ublcp1Q8BGR9 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC15.74■□□□□ 0.11
Ublcp1Q8BGR9 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ublcp1Q8BGR9 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ublcp1Q8BGR9 Gm21451-201ENSMUST00000111062 2775 ntBASIC15.74■□□□□ 0.11
Ublcp1Q8BGR9 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Ublcp1Q8BGR9 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ublcp1Q8BGR9 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ublcp1Q8BGR9 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ublcp1Q8BGR9 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ublcp1Q8BGR9 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ublcp1Q8BGR9 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ublcp1Q8BGR9 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Ublcp1Q8BGR9 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ublcp1Q8BGR9 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC15.73■□□□□ 0.11
Ublcp1Q8BGR9 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ublcp1Q8BGR9 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ublcp1Q8BGR9 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ublcp1Q8BGR9 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ublcp1Q8BGR9 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ublcp1Q8BGR9 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ublcp1Q8BGR9 Gm25745-201ENSMUST00000174945 133 ntBASIC15.73■□□□□ 0.11
Ublcp1Q8BGR9 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ublcp1Q8BGR9 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ublcp1Q8BGR9 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ublcp1Q8BGR9 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ublcp1Q8BGR9 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Ublcp1Q8BGR9 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ublcp1Q8BGR9 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ublcp1Q8BGR9 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ublcp1Q8BGR9 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ublcp1Q8BGR9 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ublcp1Q8BGR9 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ublcp1Q8BGR9 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ublcp1Q8BGR9 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ublcp1Q8BGR9 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ublcp1Q8BGR9 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC15.72■□□□□ 0.11
Ublcp1Q8BGR9 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ublcp1Q8BGR9 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Ublcp1Q8BGR9 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
Ublcp1Q8BGR9 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
Ublcp1Q8BGR9 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ublcp1Q8BGR9 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.72■□□□□ 0.11
Ublcp1Q8BGR9 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ublcp1Q8BGR9 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC15.72■□□□□ 0.11
Ublcp1Q8BGR9 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ublcp1Q8BGR9 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ublcp1Q8BGR9 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.72■□□□□ 0.11
Ublcp1Q8BGR9 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ublcp1Q8BGR9 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ublcp1Q8BGR9 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC15.72■□□□□ 0.11
Ublcp1Q8BGR9 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ublcp1Q8BGR9 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ublcp1Q8BGR9 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms