Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trnp1Q80ZI1 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC16.7■□□□□ 0.26
Trnp1Q80ZI1 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
Trnp1Q80ZI1 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trnp1Q80ZI1 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trnp1Q80ZI1 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Trnp1Q80ZI1 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trnp1Q80ZI1 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trnp1Q80ZI1 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Trnp1Q80ZI1 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trnp1Q80ZI1 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Trnp1Q80ZI1 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Trnp1Q80ZI1 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC16.7■□□□□ 0.26
Trnp1Q80ZI1 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trnp1Q80ZI1 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trnp1Q80ZI1 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trnp1Q80ZI1 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trnp1Q80ZI1 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trnp1Q80ZI1 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trnp1Q80ZI1 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trnp1Q80ZI1 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trnp1Q80ZI1 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trnp1Q80ZI1 Gm5354-201ENSMUST00000182417 973 ntBASIC16.69■□□□□ 0.26
Trnp1Q80ZI1 Gm28911-201ENSMUST00000188837 117 ntBASIC16.69■□□□□ 0.26
Trnp1Q80ZI1 Gm9182-201ENSMUST00000217829 639 ntBASIC16.69■□□□□ 0.26
Trnp1Q80ZI1 AC154846.1-201ENSMUST00000226278 862 ntBASIC16.69■□□□□ 0.26
Trnp1Q80ZI1 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trnp1Q80ZI1 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trnp1Q80ZI1 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trnp1Q80ZI1 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trnp1Q80ZI1 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trnp1Q80ZI1 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trnp1Q80ZI1 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trnp1Q80ZI1 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.69■□□□□ 0.26
Trnp1Q80ZI1 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trnp1Q80ZI1 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trnp1Q80ZI1 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trnp1Q80ZI1 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.69■□□□□ 0.26
Trnp1Q80ZI1 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trnp1Q80ZI1 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trnp1Q80ZI1 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trnp1Q80ZI1 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trnp1Q80ZI1 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trnp1Q80ZI1 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trnp1Q80ZI1 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC16.68■□□□□ 0.26
Trnp1Q80ZI1 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trnp1Q80ZI1 Trav13-3-201ENSMUST00000117226 336 ntBASIC16.68■□□□□ 0.26
Trnp1Q80ZI1 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC16.68■□□□□ 0.26
Trnp1Q80ZI1 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC16.68■□□□□ 0.26
Trnp1Q80ZI1 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC16.68■□□□□ 0.26
Trnp1Q80ZI1 Gm37230-201ENSMUST00000194491 818 ntBASIC16.68■□□□□ 0.26
Trnp1Q80ZI1 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC16.68■□□□□ 0.26
Trnp1Q80ZI1 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trnp1Q80ZI1 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trnp1Q80ZI1 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Trnp1Q80ZI1 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC16.68■□□□□ 0.26
Trnp1Q80ZI1 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trnp1Q80ZI1 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trnp1Q80ZI1 Gm5763-201ENSMUST00000155951 1530 ntBASIC16.68■□□□□ 0.26
Trnp1Q80ZI1 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trnp1Q80ZI1 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Trnp1Q80ZI1 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Trnp1Q80ZI1 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Trnp1Q80ZI1 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trnp1Q80ZI1 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trnp1Q80ZI1 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trnp1Q80ZI1 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trnp1Q80ZI1 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Trnp1Q80ZI1 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trnp1Q80ZI1 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trnp1Q80ZI1 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Trnp1Q80ZI1 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trnp1Q80ZI1 Gm4984-201ENSMUST00000115987 360 ntBASIC16.67■□□□□ 0.26
Trnp1Q80ZI1 Gm6916-202ENSMUST00000205523 195 ntBASIC16.67■□□□□ 0.26
Trnp1Q80ZI1 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC16.67■□□□□ 0.26
Trnp1Q80ZI1 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trnp1Q80ZI1 Gm10313-201ENSMUST00000095320 1002 ntBASIC16.67■□□□□ 0.26
Trnp1Q80ZI1 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trnp1Q80ZI1 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Trnp1Q80ZI1 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trnp1Q80ZI1 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trnp1Q80ZI1 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trnp1Q80ZI1 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trnp1Q80ZI1 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Trnp1Q80ZI1 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Trnp1Q80ZI1 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trnp1Q80ZI1 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trnp1Q80ZI1 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trnp1Q80ZI1 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trnp1Q80ZI1 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trnp1Q80ZI1 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC16.66■□□□□ 0.26
Trnp1Q80ZI1 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC16.66■□□□□ 0.26
Trnp1Q80ZI1 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Trnp1Q80ZI1 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trnp1Q80ZI1 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trnp1Q80ZI1 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trnp1Q80ZI1 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trnp1Q80ZI1 Gm15678-201ENSMUST00000117573 960 ntBASIC16.66■□□□□ 0.26
Trnp1Q80ZI1 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trnp1Q80ZI1 Olfr286-202ENSMUST00000205305 969 ntBASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms