Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk3bQ80YF6 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk3bQ80YF6 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk3bQ80YF6 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk3bQ80YF6 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Upk3bQ80YF6 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Upk3bQ80YF6 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Upk3bQ80YF6 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Upk3bQ80YF6 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk3bQ80YF6 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk3bQ80YF6 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk3bQ80YF6 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk3bQ80YF6 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.62□□□□□ -0.39
Upk3bQ80YF6 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk3bQ80YF6 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk3bQ80YF6 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk3bQ80YF6 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Upk3bQ80YF6 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC12.62□□□□□ -0.39
Upk3bQ80YF6 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk3bQ80YF6 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk3bQ80YF6 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Upk3bQ80YF6 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk3bQ80YF6 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Upk3bQ80YF6 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.62□□□□□ -0.39
Upk3bQ80YF6 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.62□□□□□ -0.39
Upk3bQ80YF6 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Upk3bQ80YF6 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk3bQ80YF6 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk3bQ80YF6 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Upk3bQ80YF6 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk3bQ80YF6 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk3bQ80YF6 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Upk3bQ80YF6 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Upk3bQ80YF6 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Upk3bQ80YF6 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Upk3bQ80YF6 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk3bQ80YF6 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk3bQ80YF6 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk3bQ80YF6 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk3bQ80YF6 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk3bQ80YF6 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Upk3bQ80YF6 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.61□□□□□ -0.39
Upk3bQ80YF6 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Upk3bQ80YF6 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk3bQ80YF6 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk3bQ80YF6 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk3bQ80YF6 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk3bQ80YF6 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk3bQ80YF6 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC12.61□□□□□ -0.39
Upk3bQ80YF6 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
Upk3bQ80YF6 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk3bQ80YF6 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk3bQ80YF6 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC12.61□□□□□ -0.39
Upk3bQ80YF6 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC12.61□□□□□ -0.39
Upk3bQ80YF6 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Upk3bQ80YF6 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Upk3bQ80YF6 Gm43767-201ENSMUST00000198933 381 ntBASIC12.61□□□□□ -0.39
Upk3bQ80YF6 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk3bQ80YF6 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk3bQ80YF6 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Upk3bQ80YF6 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Upk3bQ80YF6 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk3bQ80YF6 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC12.61□□□□□ -0.39
Upk3bQ80YF6 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk3bQ80YF6 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk3bQ80YF6 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Upk3bQ80YF6 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk3bQ80YF6 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC12.61□□□□□ -0.39
Upk3bQ80YF6 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Upk3bQ80YF6 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk3bQ80YF6 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk3bQ80YF6 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.61□□□□□ -0.39
Upk3bQ80YF6 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk3bQ80YF6 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk3bQ80YF6 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.61□□□□□ -0.39
Upk3bQ80YF6 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk3bQ80YF6 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Upk3bQ80YF6 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk3bQ80YF6 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Upk3bQ80YF6 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.61□□□□□ -0.39
Upk3bQ80YF6 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.61□□□□□ -0.39
Upk3bQ80YF6 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk3bQ80YF6 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk3bQ80YF6 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk3bQ80YF6 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Upk3bQ80YF6 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Upk3bQ80YF6 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Upk3bQ80YF6 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk3bQ80YF6 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk3bQ80YF6 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Upk3bQ80YF6 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk3bQ80YF6 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk3bQ80YF6 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk3bQ80YF6 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Upk3bQ80YF6 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk3bQ80YF6 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk3bQ80YF6 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk3bQ80YF6 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk3bQ80YF6 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Upk3bQ80YF6 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms