Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ttc28Q80XJ3 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ttc28Q80XJ3 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ttc28Q80XJ3 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ttc28Q80XJ3 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC12.44□□□□□ -0.42
Ttc28Q80XJ3 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ttc28Q80XJ3 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ttc28Q80XJ3 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ttc28Q80XJ3 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ttc28Q80XJ3 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.44□□□□□ -0.42
Ttc28Q80XJ3 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ttc28Q80XJ3 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ttc28Q80XJ3 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ttc28Q80XJ3 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ttc28Q80XJ3 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.44□□□□□ -0.42
Ttc28Q80XJ3 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.44□□□□□ -0.42
Ttc28Q80XJ3 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.44□□□□□ -0.42
Ttc28Q80XJ3 AC149588.3-201ENSMUST00000227515 150 ntBASIC12.44□□□□□ -0.42
Ttc28Q80XJ3 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ttc28Q80XJ3 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ttc28Q80XJ3 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ttc28Q80XJ3 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Ttc28Q80XJ3 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ttc28Q80XJ3 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ttc28Q80XJ3 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ttc28Q80XJ3 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ttc28Q80XJ3 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Ttc28Q80XJ3 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Ttc28Q80XJ3 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ttc28Q80XJ3 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC12.44□□□□□ -0.42
Ttc28Q80XJ3 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC12.44□□□□□ -0.42
Ttc28Q80XJ3 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ttc28Q80XJ3 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Ttc28Q80XJ3 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ttc28Q80XJ3 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ttc28Q80XJ3 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ttc28Q80XJ3 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Ttc28Q80XJ3 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ttc28Q80XJ3 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ttc28Q80XJ3 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC12.43□□□□□ -0.42
Ttc28Q80XJ3 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Ttc28Q80XJ3 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC12.43□□□□□ -0.42
Ttc28Q80XJ3 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Ttc28Q80XJ3 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ttc28Q80XJ3 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ttc28Q80XJ3 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ttc28Q80XJ3 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ttc28Q80XJ3 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ttc28Q80XJ3 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ttc28Q80XJ3 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ttc28Q80XJ3 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.43□□□□□ -0.42
Ttc28Q80XJ3 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC12.43□□□□□ -0.42
Ttc28Q80XJ3 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ttc28Q80XJ3 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Ttc28Q80XJ3 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ttc28Q80XJ3 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Ttc28Q80XJ3 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ttc28Q80XJ3 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ttc28Q80XJ3 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.43□□□□□ -0.42
Ttc28Q80XJ3 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ttc28Q80XJ3 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ttc28Q80XJ3 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ttc28Q80XJ3 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC12.43□□□□□ -0.42
Ttc28Q80XJ3 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.43□□□□□ -0.42
Ttc28Q80XJ3 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ttc28Q80XJ3 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.43□□□□□ -0.42
Ttc28Q80XJ3 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ttc28Q80XJ3 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ttc28Q80XJ3 Mir6392-201ENSMUST00000184924 108 ntBASIC12.43□□□□□ -0.42
Ttc28Q80XJ3 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.43□□□□□ -0.42
Ttc28Q80XJ3 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.43□□□□□ -0.42
Ttc28Q80XJ3 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ttc28Q80XJ3 Mir125a-201ENSMUST00000083545 68 ntBASIC12.43□□□□□ -0.42
Ttc28Q80XJ3 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ttc28Q80XJ3 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC12.42□□□□□ -0.42
Ttc28Q80XJ3 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ttc28Q80XJ3 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ttc28Q80XJ3 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ttc28Q80XJ3 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.42□□□□□ -0.42
Ttc28Q80XJ3 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Ttc28Q80XJ3 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ttc28Q80XJ3 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC12.42□□□□□ -0.42
Ttc28Q80XJ3 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ttc28Q80XJ3 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Ttc28Q80XJ3 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC12.42□□□□□ -0.42
Ttc28Q80XJ3 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ttc28Q80XJ3 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ttc28Q80XJ3 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Ttc28Q80XJ3 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ttc28Q80XJ3 Gm45453-201ENSMUST00000211758 853 ntBASIC12.42□□□□□ -0.42
Ttc28Q80XJ3 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.42□□□□□ -0.42
Ttc28Q80XJ3 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ttc28Q80XJ3 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.42□□□□□ -0.42
Ttc28Q80XJ3 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ttc28Q80XJ3 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ttc28Q80XJ3 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.42□□□□□ -0.42
Ttc28Q80XJ3 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ttc28Q80XJ3 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ttc28Q80XJ3 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ttc28Q80XJ3 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms