Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Gm27618-201ENSMUST00000183671 60 ntBASIC17.22■□□□□ 0.35
Prpf40bQ80W14 Gm27306-201ENSMUST00000183970 107 ntBASIC17.22■□□□□ 0.35
Prpf40bQ80W14 Mir8102-201ENSMUST00000184148 139 ntBASIC17.22■□□□□ 0.35
Prpf40bQ80W14 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC17.22■□□□□ 0.35
Prpf40bQ80W14 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Prpf40bQ80W14 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Prpf40bQ80W14 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Prpf40bQ80W14 BC037039-201ENSMUST00000192003 2205 ntBASIC17.22■□□□□ 0.35
Prpf40bQ80W14 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Prpf40bQ80W14 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Prpf40bQ80W14 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Prpf40bQ80W14 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Prpf40bQ80W14 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Prpf40bQ80W14 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Prpf40bQ80W14 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Prpf40bQ80W14 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Prpf40bQ80W14 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Prpf40bQ80W14 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf40bQ80W14 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC17.21■□□□□ 0.35
Prpf40bQ80W14 Tfap2a-203ENSMUST00000223869 2037 ntBASIC17.21■□□□□ 0.35
Prpf40bQ80W14 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf40bQ80W14 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC17.21■□□□□ 0.35
Prpf40bQ80W14 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf40bQ80W14 Gm12017-201ENSMUST00000122453 1003 ntBASIC17.21■□□□□ 0.35
Prpf40bQ80W14 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf40bQ80W14 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf40bQ80W14 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC17.21■□□□□ 0.35
Prpf40bQ80W14 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf40bQ80W14 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf40bQ80W14 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Prpf40bQ80W14 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC17.21■□□□□ 0.35
Prpf40bQ80W14 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf40bQ80W14 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf40bQ80W14 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Prpf40bQ80W14 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.35
Prpf40bQ80W14 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC17.21■□□□□ 0.35
Prpf40bQ80W14 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf40bQ80W14 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf40bQ80W14 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf40bQ80W14 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf40bQ80W14 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Prpf40bQ80W14 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Prpf40bQ80W14 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf40bQ80W14 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf40bQ80W14 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Prpf40bQ80W14 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC17.2■□□□□ 0.34
Prpf40bQ80W14 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf40bQ80W14 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf40bQ80W14 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Prpf40bQ80W14 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf40bQ80W14 Gm17837-201ENSMUST00000186435 985 ntBASIC17.2■□□□□ 0.34
Prpf40bQ80W14 Gm7653-201ENSMUST00000214567 508 ntBASIC17.2■□□□□ 0.34
Prpf40bQ80W14 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC17.2■□□□□ 0.34
Prpf40bQ80W14 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Prpf40bQ80W14 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC17.2■□□□□ 0.34
Prpf40bQ80W14 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Prpf40bQ80W14 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC17.2■□□□□ 0.34
Prpf40bQ80W14 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf40bQ80W14 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf40bQ80W14 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC17.2■□□□□ 0.34
Prpf40bQ80W14 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf40bQ80W14 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf40bQ80W14 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf40bQ80W14 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Prpf40bQ80W14 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Prpf40bQ80W14 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC17.2■□□□□ 0.34
Prpf40bQ80W14 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf40bQ80W14 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
Prpf40bQ80W14 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Prpf40bQ80W14 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
Prpf40bQ80W14 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Prpf40bQ80W14 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
Prpf40bQ80W14 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf40bQ80W14 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Prpf40bQ80W14 Gm16198-201ENSMUST00000118766 670 ntBASIC17.19■□□□□ 0.34
Prpf40bQ80W14 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf40bQ80W14 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf40bQ80W14 Gm6257-201ENSMUST00000163864 910 ntBASIC17.19■□□□□ 0.34
Prpf40bQ80W14 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf40bQ80W14 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf40bQ80W14 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf40bQ80W14 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf40bQ80W14 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf40bQ80W14 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf40bQ80W14 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf40bQ80W14 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf40bQ80W14 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf40bQ80W14 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf40bQ80W14 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf40bQ80W14 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf40bQ80W14 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf40bQ80W14 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf40bQ80W14 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf40bQ80W14 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf40bQ80W14 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf40bQ80W14 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Prpf40bQ80W14 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf40bQ80W14 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf40bQ80W14 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf40bQ80W14 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms