Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC22.88■■□□□ 1.25
Rpap1Q80TE0 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Rpap1Q80TE0 Mir6420-201ENSMUST00000185032 102 ntBASIC22.88■■□□□ 1.25
Rpap1Q80TE0 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
Rpap1Q80TE0 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Rpap1Q80TE0 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Rpap1Q80TE0 AC165157.4-201ENSMUST00000220587 139 ntBASIC22.88■■□□□ 1.25
Rpap1Q80TE0 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Rpap1Q80TE0 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC22.88■■□□□ 1.25
Rpap1Q80TE0 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Rpap1Q80TE0 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Rpap1Q80TE0 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Rpap1Q80TE0 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Rpap1Q80TE0 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
Rpap1Q80TE0 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC22.87■■□□□ 1.25
Rpap1Q80TE0 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Rpap1Q80TE0 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Rpap1Q80TE0 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC22.87■■□□□ 1.25
Rpap1Q80TE0 Gm10275-202ENSMUST00000168697 495 ntBASIC22.87■■□□□ 1.25
Rpap1Q80TE0 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Rpap1Q80TE0 AY702102-202ENSMUST00000194651 1173 ntBASIC22.87■■□□□ 1.25
Rpap1Q80TE0 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC22.87■■□□□ 1.25
Rpap1Q80TE0 AC154687.2-201ENSMUST00000223853 640 ntBASIC22.87■■□□□ 1.25
Rpap1Q80TE0 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Rpap1Q80TE0 Gm10275-201ENSMUST00000092620 635 ntBASIC22.87■■□□□ 1.25
Rpap1Q80TE0 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Rpap1Q80TE0 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
Rpap1Q80TE0 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
Rpap1Q80TE0 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Rpap1Q80TE0 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Rpap1Q80TE0 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Rpap1Q80TE0 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
Rpap1Q80TE0 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Rpap1Q80TE0 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Rpap1Q80TE0 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
Rpap1Q80TE0 Gm11839-201ENSMUST00000120647 1953 ntBASIC22.86■■□□□ 1.25
Rpap1Q80TE0 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
Rpap1Q80TE0 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Rpap1Q80TE0 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC22.86■■□□□ 1.25
Rpap1Q80TE0 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC22.86■■□□□ 1.25
Rpap1Q80TE0 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC22.86■■□□□ 1.25
Rpap1Q80TE0 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Rpap1Q80TE0 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
Rpap1Q80TE0 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Rpap1Q80TE0 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Rpap1Q80TE0 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Rpap1Q80TE0 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Rpap1Q80TE0 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Rpap1Q80TE0 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Rpap1Q80TE0 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Rpap1Q80TE0 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Rpap1Q80TE0 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Rpap1Q80TE0 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
Rpap1Q80TE0 App-207ENSMUST00000227737 2827 ntBASIC22.85■■□□□ 1.25
Rpap1Q80TE0 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Rpap1Q80TE0 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC22.85■■□□□ 1.25
Rpap1Q80TE0 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC22.85■■□□□ 1.25
Rpap1Q80TE0 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Rpap1Q80TE0 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC22.85■■□□□ 1.25
Rpap1Q80TE0 Gm19220-201ENSMUST00000222682 803 ntBASIC22.85■■□□□ 1.25
Rpap1Q80TE0 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Rpap1Q80TE0 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Rpap1Q80TE0 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Rpap1Q80TE0 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Rpap1Q80TE0 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
Rpap1Q80TE0 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Rpap1Q80TE0 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC22.85■■□□□ 1.25
Rpap1Q80TE0 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Rpap1Q80TE0 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Rpap1Q80TE0 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Rpap1Q80TE0 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Rpap1Q80TE0 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC22.85■■□□□ 1.25
Rpap1Q80TE0 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
Rpap1Q80TE0 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Rpap1Q80TE0 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC22.85■■□□□ 1.25
Rpap1Q80TE0 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC22.84■■□□□ 1.25
Rpap1Q80TE0 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Rpap1Q80TE0 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Rpap1Q80TE0 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Rpap1Q80TE0 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Rpap1Q80TE0 Gm11425-201ENSMUST00000119608 498 ntBASIC22.84■■□□□ 1.25
Rpap1Q80TE0 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Rpap1Q80TE0 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Rpap1Q80TE0 Gm9396-201ENSMUST00000076703 567 ntBASIC22.84■■□□□ 1.25
Rpap1Q80TE0 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Rpap1Q80TE0 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
Rpap1Q80TE0 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC22.84■■□□□ 1.25
Rpap1Q80TE0 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Rpap1Q80TE0 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
Rpap1Q80TE0 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
Rpap1Q80TE0 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Rpap1Q80TE0 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Rpap1Q80TE0 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Rpap1Q80TE0 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Rpap1Q80TE0 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Rpap1Q80TE0 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.25
Rpap1Q80TE0 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC22.83■■□□□ 1.25
Rpap1Q80TE0 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC22.83■■□□□ 1.25
Rpap1Q80TE0 Gm6916-202ENSMUST00000205523 195 ntBASIC22.83■■□□□ 1.25
Rpap1Q80TE0 AC121804.3-201ENSMUST00000223420 295 ntBASIC22.83■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms