Protein–RNA interactions for Protein: Q80T79

Csmd3, CUB and sushi domain-containing protein 3, mousemouse

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csmd3Q80T79 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Csmd3Q80T79 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Csmd3Q80T79 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Csmd3Q80T79 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Csmd3Q80T79 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Csmd3Q80T79 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC10.04□□□□□ -0.8
Csmd3Q80T79 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
Csmd3Q80T79 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC10.04□□□□□ -0.8
Csmd3Q80T79 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Csmd3Q80T79 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC10.04□□□□□ -0.8
Csmd3Q80T79 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Csmd3Q80T79 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Csmd3Q80T79 Gm5356-201ENSMUST00000093326 615 ntBASIC10.04□□□□□ -0.8
Csmd3Q80T79 Gm8775-201ENSMUST00000170943 1327 ntBASIC10.04□□□□□ -0.8
Csmd3Q80T79 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Csmd3Q80T79 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Csmd3Q80T79 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Csmd3Q80T79 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Csmd3Q80T79 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Csmd3Q80T79 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Csmd3Q80T79 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC10.04□□□□□ -0.8
Csmd3Q80T79 Gm18307-201ENSMUST00000206864 949 ntBASIC10.04□□□□□ -0.8
Csmd3Q80T79 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Csmd3Q80T79 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Csmd3Q80T79 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Csmd3Q80T79 Gm42473-201ENSMUST00000201056 2291 ntBASIC10.04□□□□□ -0.8
Csmd3Q80T79 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Csmd3Q80T79 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC10.04□□□□□ -0.8
Csmd3Q80T79 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Csmd3Q80T79 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Csmd3Q80T79 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Csmd3Q80T79 Gm42853-201ENSMUST00000201273 1387 ntBASIC10.04□□□□□ -0.8
Csmd3Q80T79 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Csmd3Q80T79 Gm6222-201ENSMUST00000120787 396 ntBASIC10.04□□□□□ -0.8
Csmd3Q80T79 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC10.04□□□□□ -0.8
Csmd3Q80T79 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC10.04□□□□□ -0.8
Csmd3Q80T79 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Csmd3Q80T79 Gm5354-201ENSMUST00000182417 973 ntBASIC10.04□□□□□ -0.8
Csmd3Q80T79 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC10.04□□□□□ -0.8
Csmd3Q80T79 Gm7561-201ENSMUST00000211203 886 ntBASIC10.04□□□□□ -0.8
Csmd3Q80T79 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Csmd3Q80T79 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC10.03□□□□□ -0.8
Csmd3Q80T79 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Csmd3Q80T79 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Csmd3Q80T79 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Csmd3Q80T79 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC10.03□□□□□ -0.8
Csmd3Q80T79 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Csmd3Q80T79 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Csmd3Q80T79 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC10.03□□□□□ -0.8
Csmd3Q80T79 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Csmd3Q80T79 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Csmd3Q80T79 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC10.03□□□□□ -0.8
Csmd3Q80T79 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Csmd3Q80T79 Mir125a-201ENSMUST00000083545 68 ntBASIC10.03□□□□□ -0.8
Csmd3Q80T79 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Csmd3Q80T79 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Csmd3Q80T79 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Csmd3Q80T79 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Csmd3Q80T79 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Csmd3Q80T79 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Csmd3Q80T79 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Csmd3Q80T79 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Csmd3Q80T79 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Csmd3Q80T79 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Csmd3Q80T79 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Csmd3Q80T79 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC10.03□□□□□ -0.8
Csmd3Q80T79 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC10.03□□□□□ -0.8
Csmd3Q80T79 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC10.03□□□□□ -0.8
Csmd3Q80T79 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC10.03□□□□□ -0.8
Csmd3Q80T79 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Csmd3Q80T79 AC154846.1-201ENSMUST00000226278 862 ntBASIC10.03□□□□□ -0.8
Csmd3Q80T79 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Csmd3Q80T79 Gm10012-201ENSMUST00000078252 192 ntBASIC10.03□□□□□ -0.8
Csmd3Q80T79 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Csmd3Q80T79 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Csmd3Q80T79 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Csmd3Q80T79 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Csmd3Q80T79 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Csmd3Q80T79 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Csmd3Q80T79 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Csmd3Q80T79 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Csmd3Q80T79 AC159896.2-201ENSMUST00000214753 269 ntBASIC10.03□□□□□ -0.8
Csmd3Q80T79 AC154319.1-201ENSMUST00000216330 312 ntBASIC10.03□□□□□ -0.8
Csmd3Q80T79 AL589735.1-201ENSMUST00000224353 270 ntBASIC10.03□□□□□ -0.8
Csmd3Q80T79 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Csmd3Q80T79 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Csmd3Q80T79 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.8
Csmd3Q80T79 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.8
Csmd3Q80T79 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Csmd3Q80T79 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Csmd3Q80T79 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Csmd3Q80T79 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Csmd3Q80T79 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.8
Csmd3Q80T79 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Csmd3Q80T79 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Csmd3Q80T79 Prob1-201ENSMUST00000097619 3021 ntBASIC10.02□□□□□ -0.81
Csmd3Q80T79 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Csmd3Q80T79 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC10.02□□□□□ -0.81
Csmd3Q80T79 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC10.02□□□□□ -0.81
Csmd3Q80T79 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC10.02□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms