Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ush1gQ80T11 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ush1gQ80T11 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Ush1gQ80T11 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ush1gQ80T11 Gm11543-201ENSMUST00000120758 370 ntBASIC16.31■□□□□ 0.2
Ush1gQ80T11 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ush1gQ80T11 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ush1gQ80T11 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ush1gQ80T11 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ush1gQ80T11 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC16.31■□□□□ 0.2
Ush1gQ80T11 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ush1gQ80T11 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Ush1gQ80T11 AC140375.2-201ENSMUST00000225283 584 ntBASIC16.31■□□□□ 0.2
Ush1gQ80T11 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ush1gQ80T11 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ush1gQ80T11 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Ush1gQ80T11 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ush1gQ80T11 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ush1gQ80T11 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Ush1gQ80T11 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ush1gQ80T11 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ush1gQ80T11 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ush1gQ80T11 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Ush1gQ80T11 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ush1gQ80T11 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ush1gQ80T11 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ush1gQ80T11 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ush1gQ80T11 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ush1gQ80T11 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ush1gQ80T11 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ush1gQ80T11 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ush1gQ80T11 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ush1gQ80T11 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.3■□□□□ 0.2
Ush1gQ80T11 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Ush1gQ80T11 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ush1gQ80T11 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Ush1gQ80T11 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ush1gQ80T11 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ush1gQ80T11 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ush1gQ80T11 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Ush1gQ80T11 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ush1gQ80T11 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ush1gQ80T11 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC16.3■□□□□ 0.2
Ush1gQ80T11 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC16.3■□□□□ 0.2
Ush1gQ80T11 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC16.3■□□□□ 0.2
Ush1gQ80T11 Gm5866-201ENSMUST00000177881 973 ntBASIC16.3■□□□□ 0.2
Ush1gQ80T11 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ush1gQ80T11 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ush1gQ80T11 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Ush1gQ80T11 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ush1gQ80T11 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ush1gQ80T11 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Ush1gQ80T11 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ush1gQ80T11 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ush1gQ80T11 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ush1gQ80T11 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Ush1gQ80T11 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ush1gQ80T11 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ush1gQ80T11 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ush1gQ80T11 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Ush1gQ80T11 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ush1gQ80T11 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ush1gQ80T11 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ush1gQ80T11 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ush1gQ80T11 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ush1gQ80T11 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ush1gQ80T11 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ush1gQ80T11 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ush1gQ80T11 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ush1gQ80T11 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Ush1gQ80T11 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Ush1gQ80T11 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ush1gQ80T11 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Ush1gQ80T11 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ush1gQ80T11 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC16.29■□□□□ 0.2
Ush1gQ80T11 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ush1gQ80T11 Gm6973-201ENSMUST00000117080 721 ntBASIC16.29■□□□□ 0.2
Ush1gQ80T11 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Ush1gQ80T11 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ush1gQ80T11 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ush1gQ80T11 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ush1gQ80T11 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Ush1gQ80T11 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC16.29■□□□□ 0.2
Ush1gQ80T11 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC16.29■□□□□ 0.2
Ush1gQ80T11 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ush1gQ80T11 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ush1gQ80T11 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ush1gQ80T11 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Ush1gQ80T11 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ush1gQ80T11 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ush1gQ80T11 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ush1gQ80T11 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ush1gQ80T11 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC16.29■□□□□ 0.2
Ush1gQ80T11 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ush1gQ80T11 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ush1gQ80T11 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Ush1gQ80T11 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ush1gQ80T11 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ush1gQ80T11 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ush1gQ80T11 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms