Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ctdp1Q7TSG2 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ctdp1Q7TSG2 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Ctdp1Q7TSG2 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ctdp1Q7TSG2 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ctdp1Q7TSG2 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Ctdp1Q7TSG2 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ctdp1Q7TSG2 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Ctdp1Q7TSG2 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ctdp1Q7TSG2 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.29■□□□□ 0.2
Ctdp1Q7TSG2 Gm12644-201ENSMUST00000119935 606 ntBASIC16.29■□□□□ 0.2
Ctdp1Q7TSG2 Gm27459-201ENSMUST00000184860 107 ntBASIC16.29■□□□□ 0.2
Ctdp1Q7TSG2 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ctdp1Q7TSG2 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Ctdp1Q7TSG2 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ctdp1Q7TSG2 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ctdp1Q7TSG2 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ctdp1Q7TSG2 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ctdp1Q7TSG2 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ctdp1Q7TSG2 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ctdp1Q7TSG2 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ctdp1Q7TSG2 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ctdp1Q7TSG2 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ctdp1Q7TSG2 Carlr-201ENSMUST00000181515 2574 ntBASIC16.29■□□□□ 0.2
Ctdp1Q7TSG2 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ctdp1Q7TSG2 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ctdp1Q7TSG2 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Ctdp1Q7TSG2 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC16.28■□□□□ 0.2
Ctdp1Q7TSG2 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC16.28■□□□□ 0.2
Ctdp1Q7TSG2 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Ctdp1Q7TSG2 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Ctdp1Q7TSG2 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ctdp1Q7TSG2 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC16.28■□□□□ 0.2
Ctdp1Q7TSG2 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ctdp1Q7TSG2 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ctdp1Q7TSG2 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ctdp1Q7TSG2 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.28■□□□□ 0.2
Ctdp1Q7TSG2 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ctdp1Q7TSG2 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC16.28■□□□□ 0.2
Ctdp1Q7TSG2 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ctdp1Q7TSG2 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.28■□□□□ 0.2
Ctdp1Q7TSG2 Gm43347-201ENSMUST00000200226 580 ntBASIC16.28■□□□□ 0.2
Ctdp1Q7TSG2 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.28■□□□□ 0.2
Ctdp1Q7TSG2 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.28■□□□□ 0.2
Ctdp1Q7TSG2 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.28■□□□□ 0.2
Ctdp1Q7TSG2 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ctdp1Q7TSG2 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ctdp1Q7TSG2 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ctdp1Q7TSG2 Gm42632-201ENSMUST00000201707 2411 ntBASIC16.28■□□□□ 0.2
Ctdp1Q7TSG2 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ctdp1Q7TSG2 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
Ctdp1Q7TSG2 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ctdp1Q7TSG2 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.27■□□□□ 0.2
Ctdp1Q7TSG2 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ctdp1Q7TSG2 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ctdp1Q7TSG2 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ctdp1Q7TSG2 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ctdp1Q7TSG2 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ctdp1Q7TSG2 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ctdp1Q7TSG2 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Ctdp1Q7TSG2 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ctdp1Q7TSG2 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ctdp1Q7TSG2 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.27■□□□□ 0.2
Ctdp1Q7TSG2 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
Ctdp1Q7TSG2 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.27■□□□□ 0.2
Ctdp1Q7TSG2 Gm7286-201ENSMUST00000182691 1007 ntBASIC16.27■□□□□ 0.2
Ctdp1Q7TSG2 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.27■□□□□ 0.2
Ctdp1Q7TSG2 Gm19164-201ENSMUST00000210667 640 ntBASIC16.27■□□□□ 0.2
Ctdp1Q7TSG2 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.27■□□□□ 0.2
Ctdp1Q7TSG2 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.27■□□□□ 0.2
Ctdp1Q7TSG2 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.27■□□□□ 0.2
Ctdp1Q7TSG2 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.27■□□□□ 0.2
Ctdp1Q7TSG2 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ctdp1Q7TSG2 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ctdp1Q7TSG2 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Ctdp1Q7TSG2 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Ctdp1Q7TSG2 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Ctdp1Q7TSG2 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ctdp1Q7TSG2 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Ctdp1Q7TSG2 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Ctdp1Q7TSG2 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ctdp1Q7TSG2 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ctdp1Q7TSG2 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Ctdp1Q7TSG2 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ctdp1Q7TSG2 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ctdp1Q7TSG2 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ctdp1Q7TSG2 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ctdp1Q7TSG2 Gm44291-201ENSMUST00000203102 2865 ntBASIC16.26■□□□□ 0.19
Ctdp1Q7TSG2 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ctdp1Q7TSG2 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Ctdp1Q7TSG2 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ctdp1Q7TSG2 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ctdp1Q7TSG2 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ctdp1Q7TSG2 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.26■□□□□ 0.19
Ctdp1Q7TSG2 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ctdp1Q7TSG2 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ctdp1Q7TSG2 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ctdp1Q7TSG2 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ctdp1Q7TSG2 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Ctdp1Q7TSG2 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms