Protein–RNA interactions for Protein: Q78RX3

Smim12, Small integral membrane protein 12, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim12Q78RX3 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smim12Q78RX3 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Smim12Q78RX3 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smim12Q78RX3 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.55□□□□□ -0.4
Smim12Q78RX3 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smim12Q78RX3 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smim12Q78RX3 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smim12Q78RX3 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smim12Q78RX3 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Smim12Q78RX3 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smim12Q78RX3 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Smim12Q78RX3 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Smim12Q78RX3 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smim12Q78RX3 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC12.54□□□□□ -0.4
Smim12Q78RX3 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Smim12Q78RX3 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.54□□□□□ -0.4
Smim12Q78RX3 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Smim12Q78RX3 Gm7935-201ENSMUST00000100555 1278 ntBASIC12.54□□□□□ -0.4
Smim12Q78RX3 Gm7284-201ENSMUST00000131667 944 ntBASIC12.54□□□□□ -0.4
Smim12Q78RX3 Gm11780-201ENSMUST00000136880 516 ntBASIC12.54□□□□□ -0.4
Smim12Q78RX3 Gm4535-201ENSMUST00000182274 558 ntBASIC12.54□□□□□ -0.4
Smim12Q78RX3 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC12.54□□□□□ -0.4
Smim12Q78RX3 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Smim12Q78RX3 Gm37584-201ENSMUST00000193595 1290 ntBASIC12.54□□□□□ -0.4
Smim12Q78RX3 Gm33142-201ENSMUST00000193913 867 ntBASIC12.54□□□□□ -0.4
Smim12Q78RX3 Cmtm5-203ENSMUST00000227441 610 ntBASIC12.54□□□□□ -0.4
Smim12Q78RX3 AC154757.1-201ENSMUST00000228289 336 ntBASIC12.54□□□□□ -0.4
Smim12Q78RX3 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smim12Q78RX3 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smim12Q78RX3 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smim12Q78RX3 Gm10355-201ENSMUST00000097146 517 ntBASIC12.54□□□□□ -0.4
Smim12Q78RX3 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Smim12Q78RX3 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smim12Q78RX3 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smim12Q78RX3 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smim12Q78RX3 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smim12Q78RX3 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim12Q78RX3 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Smim12Q78RX3 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Smim12Q78RX3 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim12Q78RX3 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim12Q78RX3 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim12Q78RX3 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim12Q78RX3 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim12Q78RX3 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.53□□□□□ -0.4
Smim12Q78RX3 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim12Q78RX3 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim12Q78RX3 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim12Q78RX3 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim12Q78RX3 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim12Q78RX3 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim12Q78RX3 Gm13836-201ENSMUST00000121159 501 ntBASIC12.53□□□□□ -0.4
Smim12Q78RX3 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC12.53□□□□□ -0.4
Smim12Q78RX3 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim12Q78RX3 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC12.53□□□□□ -0.4
Smim12Q78RX3 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Smim12Q78RX3 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC12.53□□□□□ -0.4
Smim12Q78RX3 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim12Q78RX3 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim12Q78RX3 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim12Q78RX3 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Smim12Q78RX3 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Smim12Q78RX3 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim12Q78RX3 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Smim12Q78RX3 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim12Q78RX3 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim12Q78RX3 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim12Q78RX3 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim12Q78RX3 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim12Q78RX3 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Smim12Q78RX3 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Smim12Q78RX3 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim12Q78RX3 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Smim12Q78RX3 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim12Q78RX3 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim12Q78RX3 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Smim12Q78RX3 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim12Q78RX3 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim12Q78RX3 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim12Q78RX3 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Smim12Q78RX3 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Smim12Q78RX3 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Smim12Q78RX3 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Smim12Q78RX3 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.52□□□□□ -0.4
Smim12Q78RX3 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smim12Q78RX3 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smim12Q78RX3 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Smim12Q78RX3 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC12.52□□□□□ -0.41
Smim12Q78RX3 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Smim12Q78RX3 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
Smim12Q78RX3 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Smim12Q78RX3 Gm37153-201ENSMUST00000193637 231 ntBASIC12.52□□□□□ -0.41
Smim12Q78RX3 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smim12Q78RX3 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Smim12Q78RX3 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smim12Q78RX3 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smim12Q78RX3 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Smim12Q78RX3 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Smim12Q78RX3 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smim12Q78RX3 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms